Halophilic archaeon: Halar_0992
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Entry
Halar_0992 CDS
T01603
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hah03016
]
Halar_0992
Enzymes [BR:
hah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Halar_0992
Transfer RNA biogenesis [BR:
hah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halar_0992
Prokaryotic type
Halar_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEN04757
LinkDB
All DBs
Position
275952..277322
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AA seq
456 aa
AA seq
DB search
MREAHSRERIVGIDWYASDADGVGGRLRDRPADFRVRELEAFATEPVEADTGDYPYLVLR
ASLTGWDTNDFASRLSDALSISRERVDWAGTKDKYAVTTQLFSIYDADPADLPEIRDAEI
EVVGRAGRHLSYGDLAGNAFEITVRDPKSPENADEITEQLRAFAGDSDRAGVPNIFGHQR
FGSRRPVTHEVGLHIVRGEWRGAVLSYVGNPFETEPEDTQSARGFVDEQAVSDEPDWDAC
LDRMPRKLGYERSMLHRLRERETGSGDPSAGSDQETPDPWRYALEAVPSNLQRLFVNAAQ
SYAFNRILSERLERGLPFERPVTGDVCCFADNAIDAVRKPDPDRLQRATESRVDVLTRHC
ERGRAFVTAPLIGTETEFAEGEPGDIEREVFDDLGLEPSMFSLPGEFDSTGTRRAVLVDS
ALAVTHDPLTFEFALPSGSYATAVLREYLKTDPGSL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcccactcccgcgagcgaatcgtcggcatcgattggtacgctagcgacgcc
gacggggtcggcggccgcctccgcgaccgcccggcggatttccgtgttcgggaactcgag
gcgttcgccaccgagcctgtcgaggccgacaccggcgattacccgtatctcgtcctccga
gccagcttgaccggctgggacaccaacgatttcgccagccggctctccgacgcgctctcg
atctcccgcgagcgggtcgactgggccggcaccaaagacaagtacgccgtcaccacacag
ctcttctcgatttacgacgccgacccagccgatttgccggagatccgcgacgcagaaatc
gaggtggtcggacgggccggacgacacctctcctacggcgacctcgcgggcaacgccttc
gagattaccgttcgagaccccaagagtcctgagaacgccgacgagattaccgagcaactc
cgagcgttcgccggcgacagcgaccgtgcgggtgtcccgaacatcttcggtcaccagcgc
ttcggcagccgccggcccgtcacccacgaggtcggcctccacatcgtccgcggcgagtgg
cgcggtgcggtgctgtcctacgtcggcaaccccttcgagacagagcctgaagacacgcaa
tcggcccgcggcttcgtcgacgagcaggcggtgagtgacgagcccgactgggacgcctgc
ctcgaccggatgcccaggaaactgggctacgagcggtcgatgcttcaccgcctccgcgag
cgggagaccgggagcggtgaccccagtgcgggcagcgaccaggagacacccgacccgtgg
cgctacgcgctggaagcggtcccctcgaacttgcagcggctgttcgtcaacgccgcacag
tcctacgcgttcaaccgcattctgagcgagcgcctggagcgaggactgccgttcgagcgc
cccgtcaccggcgacgtgtgctgtttcgcggacaacgcaatagatgccgtccgtaagccc
gacccggaccgcctccagcgcgcgaccgagagccgggtcgacgtactcacgcgccactgc
gagcgcgggcgggcattcgtcaccgccccgctcatcgggaccgaaaccgagttcgctgag
ggcgaaccgggtgacatcgagcgcgaggtgttcgacgacctcgggctggagccctcgatg
ttctcactcccgggagagttcgactccaccgggacgcgtcgggcggtgctggtcgactcg
gcgttggctgtgacacacgacccgctcaccttcgagttcgcgttgccctcggggagctac
gcgacggcggtgctccgggagtatctgaagaccgaccccggctccctgtag
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