Halophilic archaeon DL31: Halar_1306
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Entry
Halar_1306 CDS
T01603
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hah
Halophilic archaeon DL31
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_1306
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halar_1306
Archaeal homologous recombinant proteins
Halar_1306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_27
AAA_15
AAA_29
DUF3584
FapA
AAA_13
FliJ
DUF1664
ABC_tran
GAS
Motif
Other DBs
NCBI-ProteinID:
AEN05052
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Position
583420..586116
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AA seq
898 aa
AA seq
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MRFDRLRLRNFKPHTDTDLRLEEGVTVIHGLNGSGKSSLLEACFFALYGSTTLEGTLNDA
VTTGADETDVELWFTHGGEEYHITRELRRYGDSISTTTCTLEGPDGVIEGATDVREFVGN
ELLRMDSEAFRNCAYIRQGEVNRLINASARDRQKMIDDLLQLGKLEEYRDRAGDARLGVE
DVLADRRGGLNKLADQIEAKEEKDLHGRLNELETELSGVDEELERFEENRETAQKSRDEA
AAVIEEAAERESELEAYEADIEELEQAIREAESEREALMERITEARETIEQKQESFEELT
VAADLDAATAEAVAAARDEIDEKESDLREELQERRERVTALENQSTNVAEKAEQAQERAA
EKRERAAELEEDAENAQEDREARREKLAELQSERETLVERFADAPVDLGEASSYRESVED
ELDSLREEIQETVATLTSARDSVEAAEALLEEGKCPECGQPVADSPHVDTLQDDRERVES
LAARLGELNGTKSDLQAELETAESLLEAESRIEQLDETRAMHEERIEELEASIEEAEAAA
ETRHEEANELVEAAEEAAEDADAKGEEAETLQQNVAAAEDGLDALDERRIRLESVEAVLD
SIDDLETDIDRLRDQRESKAELLSERRERLADLRESRNDLREAFDEERVADARDQRQTAV
EYLEKVEAKLETLQGRRDELTGNIGSVKNELESLAELREQRDAVAETVERLESLHAETEQ
LEQSYGDLRAELRQRNVENLERMLNETFDLVYGNDAYAHIELDGEYELTVYQKDGTPLAP
EQLSGGERALFNLSLRCAIYRLLSEGIEGAAPTPPLILDEPTVFLDSGHVSRLVDLVEEM
RGFGVRQILIVSHDDELVDAADALVTVEKDTTTNRSTVHQEDAATLGEVEALIGNGDD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgaccgactgcggctccggaacttcaaaccgcacacagacacggacctccgg
ctggaggagggagtgacggtcatccacgggctcaacggctcggggaagtcctcgttgctc
gaggcgtgtttcttcgcactctacggctccacaacgctcgagggaaccttgaacgacgcg
gtgacgactggcgccgacgagaccgatgtggagctgtggttcacccacggcggcgaggag
taccacatcactcgcgagctccggcgctatggcgactccatctccaccacgacctgcacg
ctcgaagggcccgacggcgtcatcgagggggcgacggacgtccgagagttcgtggggaac
gaactgctgcggatggacagcgaggcgttccgcaactgtgcgtacatccgacagggcgag
gtgaatcggctcatcaacgcctccgcgcgcgaccggcagaagatgatcgacgacctgctc
cagctcgggaagttggaggagtaccgcgaccgcgctggcgacgctcggctcggcgtcgag
gacgttctggccgaccgccggggtggcctcaacaaactggcggaccagatcgaggcgaaa
gaagagaaagacctccacggccggctcaacgaactcgagaccgaactctccggggtggac
gaggagctcgaacgcttcgaggagaaccgcgaaaccgcccagaagagccgagacgaggca
gcggcggtcatcgaggaggctgcagagcgtgagagcgaactcgaggcctacgaagcggat
atcgaggaactcgaacaggcaatccgcgaggctgagagcgagcgggaggcgctgatggag
cgcatcaccgaggctcgtgagaccattgaacagaaacaggagagctttgaggaactcacc
gtggctgcggacctcgacgcagcgacagccgaggccgtcgcggctgcgcgagacgagatc
gacgagaaggaatccgacctccgcgaggaactgcaagagcgccgcgagcgggtgaccgct
ctcgagaaccagtccacgaacgtggctgagaaggccgaacaggctcaggaacgcgccgct
gagaagcgcgaacgcgctgcggaactcgaggaagatgccgagaacgcccaggaggaccgc
gaggcacgacgagaaaaactggcggagctgcagtccgaacgcgagaccctcgtcgagcga
ttcgcggatgcgccagtcgacctgggggaggcatcgtcctaccgcgagtcagttgaggac
gaactggactccctccgcgaggagattcaggagactgtcgcgaccctgacctccgcgcgg
gacagcgtggaagcggccgaagcactgctggaggagggaaaatgtcccgagtgcggccag
ccagttgcggattcgccacacgtcgacaccctccaggacgatcgtgaacgggtggagtca
ctggcggctcggctgggggaactgaatgggacgaagagcgacctgcaagccgaactcgag
acggccgaatcactcctcgaggcagagagccgtatcgagcaactcgacgagaccagagcg
atgcacgaggagcgcatcgaggagctcgaagcgagtatcgaggaggccgaagcggccgcc
gaaacgcgccacgaggaggccaatgaactggtcgaagcggccgaagaggcggccgaggac
gccgacgcgaagggcgaggaagccgaaacgctccaacagaatgtggcggcggccgaagac
ggcctggacgcactcgacgagcgtcgaatcaggcttgagagtgtggaggcggtcctcgac
agtatcgacgacctggagaccgatatcgaccgcctgcgcgaccagcgcgagagcaaagcc
gaactgctttccgagcgccgggagcgactcgcggacctccgggagagccgcaacgacctc
cgcgaggcgttcgacgaggaacgggtcgcggacgctcgggaccagcgccagacggctgtg
gagtatctcgagaaggtcgaggcaaaactcgagaccctccaggggcgccgtgacgagctt
accggaaacatcgggagtgtcaagaacgaactcgagagtctcgcggagctccgcgagcag
cgcgacgcggtcgccgaaaccgtcgagcggctggagtcactccacgccgaaaccgaacag
ctcgagcagagctacggcgacctgcgggcggaactccgccagcgcaacgttgagaacttg
gaacgaatgctgaacgagacgttcgacctggtctatggcaacgacgcatacgcccacatc
gaactcgacggcgagtacgaactcaccgtctaccagaaggacggcacgccactggcaccc
gagcagctctccggcggcgagcgcgcgctgttcaacctctcgctccggtgtgccatctat
cggttgctctcggagggtatcgaaggggcggcgccgacgccgccgctcatcctcgacgaa
ccgacggtcttcctcgactccggccacgtctctcggctggtcgacctggtcgaggagatg
cggggcttcggcgtccgacagatcctcatcgtgagccacgacgacgaactggtcgacgcc
gcggacgcactggtcaccgtcgaaaaagacacgacgacgaaccgctctaccgtgcaccag
gaggacgcagcgacgctgggcgaggtggaggcgttgatcggcaacggcgacgactga
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