Halophilic archaeon: Halar_1362
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Entry
Halar_1362 CDS
T01603
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hah
Halophilic archaeon
Pathway
hah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Halar_1362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_1362
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Halar_1362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_21
IMS_HHH
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEN05107
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Position
complement(638250..640028)
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AA seq
592 aa
AA seq
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MRLQEYWGIGPKTAELLEGELGVERAIGAIESADIRTLAAAGLSRGRATRILRRATGAKG
LKLLATGDARAVYDDLLDLAAEAALTAHAADRIRVLTPLESQETAGERLDRVERATEALE
GLDEDDREAVVDAFEQYDDASESRRAAVDAAIALRDVSIADDADGGTFERLAAVDEPALQ
AAATALGSVEGGVLESEGDDGLTVSEGADQRLDSLRAELAAVQRLDDAALDVLETVRGRG
VRSLEEFQRAVVAYVAEESGVTESEVRAAAPDDARDETDFVTATLRSLVEELESRVADRE
AAVAEDIRDAIDAAGADVEAAVDAVDALAFELSLARFAVAWDLCRPELVEDGLAVCNARN
LFVEDPQAVSYGVGAHAVNCGELTPPNGDRVAVLTGANSGGKTTLLETLCQISLLAAMGL
PVPADAAEVGAFTTVVFHRRHASFNAGVLESTLRSVVPPLTGEGRTLMLVDEFEAITEPG
RAADLLNGLVDLTVTRGALGVYVTHLAEDLSPLPPEARVDGIFAEGLTDDLRLQVDYQPR
FGTIGKSTPEFIVSRLVANAANRDEREAFRSIAVAVGEEAVQRTLSDAEWEK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcaggagtactggggcatcggcccgaagacggccgagctgctcgagggagaa
ctgggcgtagagcgggcgattggcgccatcgagtcggccgacattcggacgctcgcggcg
gcgggcctcagccgggggcgtgcgacccgtattctccgccgggcgactggggcaaaggga
ctcaaactgctcgcgaccggggatgcccgggccgtgtacgacgacctgctggaccttgct
gccgaggctgcactcaccgcacacgcggccgaccgcatccgcgtactcacaccactcgag
agccaggagaccgcgggcgaacggcttgacagagtcgagcgcgcgaccgaagcgttggaa
gggctggacgaagacgaccgcgaggctgtggtcgacgcgttcgagcagtacgatgatgcg
agcgagagtcgccgagcggctgtcgacgctgcaatcgcgctcagggatgtgagcatcgcc
gacgacgccgacggcgggaccttcgaacggctcgcagccgtcgacgagccggcgcttcag
gcggccgcgaccgcgctcggttcggtcgaaggtggcgtcctcgaaagcgagggcgatgac
gggctcacggttagtgagggtgccgaccaacggctcgacagcctccgcgccgaactcgct
gcagtccaacggctggacgacgccgcactcgacgtgctagagacagtccgcgggcgtggc
gtgcgctcgctcgaggagttccagcgcgcggtcgtcgcctacgtcgccgaggagtccggc
gtgaccgagagcgaagtccgagccgctgcaccagacgacgctcgcgacgagactgatttc
gtcaccgcgacactgcgctcgctcgtcgaggaacttgagtcccgcgtcgccgaccgggag
gcggcggtggccgaggacatccgggacgccatcgacgccgcgggcgcggatgtagaggcc
gctgtcgacgcggtcgacgcgctggcgttcgaactctcgctcgcccggttcgcggtcgct
tgggatttgtgccgcccagagctcgtcgaggacggcctcgcggtctgtaacgctcggaac
ctcttcgtcgaggacccccaggccgtgagctacggcgtcggggcgcacgccgtgaactgc
ggtgagctgactccaccgaacggtgaccgcgtggcagtgctgacaggtgcgaactccggc
gggaaaacgacgctgctggagacgctctgtcagatatcgctgctggcggcgatggggctg
ccagtgcccgccgacgcagccgaagtcggcgcgttcacgactgtggtgtttcaccgccgg
cacgcctcgttcaacgccggcgtcttggagtcgacgcttcgctcggtcgtcccgccgttg
acgggcgaaggccggacgctaatgttggtcgacgagttcgaggccattaccgaaccaggt
cgggcggcagatctgctcaatgggctggtagatctcacagtcacccgtggcgcactgggt
gtctacgtcacccacctcgcagaggacctctcgccgctccctccggaggcgcgcgtcgac
gggatcttcgcagaagggctgaccgacgacctacggctccaggtggattaccagccccgg
ttcggcaccatcgggaagtccacaccggagttcatcgtctcgcggctggtcgccaacgca
gccaaccgcgacgagcgtgaggcgttccgttcgattgctgtggctgtgggcgaggaggca
gtgcagcggacgctctccgacgcggagtgggagaagtaa
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