Halophilic archaeon: Halar_1461
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Entry
Halar_1461 CDS
T01603
Name
(GenBank) Squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hah
Halophilic archaeon
Pathway
hah00100
Steroid biosynthesis
hah00909
Sesquiterpenoid and triterpenoid biosynthesis
hah01100
Metabolic pathways
hah01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Halar_1461
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Halar_1461
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hah01006
]
Halar_1461
Enzymes [BR:
hah01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Halar_1461
Prenyltransferases [BR:
hah01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Halar_1461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Arg_decarbox_C
DUF7691
TerB
Motif
Other DBs
NCBI-ProteinID:
AEN05197
LinkDB
All DBs
Position
complement(731712..732785)
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AA seq
357 aa
AA seq
DB search
MPGPDPHPDVPNADLEWCHEAVQDVSRTFALTVDVLEEPMSSYICLGYLLCRVADTVEDA
SHIPPEEQAALLRQFDAALDSDSEADIETFASNVQEWLPEEAEREVDWTVVKEAPRIVGT
FEKLPADVRDAVTPPVREMVTGMSVFLERYADEGGLRIQDRAELEEYCYYAAGTVGTLIT
NLVTRGEVDDARERTLDETAEGFGLLLQLVNVSKDVYDDFEHENNVYLPAEWLEEEGVAQ
DAVLDPENREGVAAVVHRTTDLARSYVDDAATYLQHVPLRDGNTLEAWAVPFLLAVGTLR
ELREHPEDALTDAGVKVSRQEVFAVVSAMSDRGRDSLPDFQDRIASQPFHLAPTGAD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacccgaccctcacccggacgttcccaatgcggacctcgaatggtgtcacgag
gccgtccaggacgtctcccgcaccttcgcactgaccgttgacgtactggaggagccgatg
tcctcctacatctgtctcggctatctgctctgtcgcgtggccgacaccgtcgaggatgcg
tcccacatcccaccagaggagcaggctgcgctcctccgacagttcgacgcggccctggac
tcagattccgaagcggatatcgagacgttcgcctcgaacgttcaggagtggctgcccgaa
gaggccgagcgcgaggtcgactggaccgtcgtgaaagaagcaccacgaatcgtcgggacg
ttcgagaaactgcccgccgacgtgcgcgatgcggtgacgccaccagtgcgggagatggtg
accgggatgagtgtgttcctcgagcgctacgccgacgaaggggggctccgcatccaggac
cgcgccgaactcgaggagtactgctactacgcggctggcaccgtgggcaccctcatcact
aatctggtcactcgcggcgaggttgatgacgctcgcgaacggacgctagatgagacggcc
gaggggttcggcctgctgctccagttggtcaacgtctcgaaagacgtctacgacgatttc
gaacacgagaacaacgtctacctccccgctgagtggctcgaggaggaaggggtagcccaa
gatgcggtgctcgaccccgagaaccgagagggcgtcgccgccgtcgtccaccggacgaca
gacctggcgcgttcctacgtcgacgacgccgccacgtatctccagcacgtcccgctccgg
gacggaaacacgctcgaggcgtgggcggtgccgttcctcctcgcggtcggaacactccgc
gaactccgcgaacatccagaggacgccctgactgatgctggcgtgaaggtgtcgcgacag
gaggtgtttgccgtcgtcagcgcgatgagcgaccgtgggcgggactcgctgccagatttc
caggaccgcatcgcttcgcagccgttccatctcgcgccgaccggcgcggactga
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