Halophilic archaeon: Halar_1618
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Entry
Halar_1618 CDS
T01603
Name
(GenBank) transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hah03000
]
Halar_1618
Transcription factors [BR:
hah03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halar_1618
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
MarR_2
Regulator_TrmB
Rrf2
PLDc_2
iHKD
Motif
Other DBs
NCBI-ProteinID:
AEN05345
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Position
complement(876885..877724)
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AA seq
279 aa
AA seq
DB search
MTDTDLFSVLNLTEYEEAALRELLHLGQSSAPDLAEATSIPKARIYGVLDSLANQGYVKV
IPGRPKQYQAKHPDDLVEQALESRRQEFESYREQIESVREEFLAEYEPIYDQAADDIRPT
EELFYVVDVGEPSQRETRALYESAESEIRVLTKSFGYVSEVESALADAVERGVSVSALLL
APRHLLAENRRRQTDIIDYLHDSYPEIELRFSDERMPWRGTLIDPSMEYDSGEATFLVEQ
EEVANHLRQAAVTENAAFVAGFARYFNLIWEYESSRVRQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactgacctgttctctgttctcaacctgaccgagtacgaggaggccgcgctg
cgggagctactccatctcggccagtcctcagcccctgatctcgcggaagcgacgagcatc
ccgaaggcgcggatatatggcgtgcttgactcactagctaatcaaggatacgtgaaagtg
attccgggacgaccgaaacagtatcaggcaaaacacccggatgacctcgtcgaacaagcc
ctcgaaagccggcgccaagagttcgaaagctatcgggagcagatcgagagcgtgagggag
gagttcctcgcggagtacgaaccgatctatgaccaagcggctgacgacatcaggccgacc
gaggagttgttctacgtcgtcgatgtgggcgagccgagtcaacgagagacacgagcgctg
tacgagagcgcggagtctgaaatcagggtactcaccaagagctttggctacgtgtccgag
gtggagtccgcactagcggacgcagtggagcgcggggtttctgtgtccgccctgttgctt
gcaccacgccaccttttagcggagaaccgacggcgacaaacggacattatcgactatcta
cacgactcgtacccggagatcgagctccggtttagcgatgagcggatgccatggcggggg
accctcatcgacccgagcatggagtacgactcgggggaggcaaccttcctcgtcgagcag
gaagaggttgctaaccaccttcggcaggccgcggtaacagaaaacgccgcgttcgtcgcc
ggcttcgcccggtactttaatctcatctgggagtacgaaagttctcgtgtgcggcagtag
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