Halophilic archaeon: Halar_1743
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Entry
Halar_1743 CDS
T01603
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hah
Halophilic archaeon
Pathway
hah02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Halar_1743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hah02000
]
Halar_1743
Transporters [BR:
hah02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Halar_1743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
DUF8130
Motif
Other DBs
NCBI-ProteinID:
AEN05460
LinkDB
All DBs
Position
1005066..1006262
Genome browser
AA seq
398 aa
AA seq
DB search
MASRDKELRRSNRRTFLKVGGASTIGMAGLAGCLTGGGDDDDDGGDGGDDTTTTDSDSDN
GGDTTTESDDAMDFGGADLNVMLNVGAISTVHKQHLIPRVEEKYNLNINTTTAVTTSQLT
QVQASPDSPPDVLIPDVIGVERASREEWLEPLTDHTDLVPQVDNIYDKFVHYDGAGASWE
VGEVLPVINSNMWDSTPTSHAEVMQNSNSTAVVPFSWSGGPYLLLMASAIATGEPFSSRL
DVQAGFDWMEENFAPNVSSEYGGVASAKQQLASGNVDSLNLFWDYMVFDMFQDDAPIETL
FRLDPKGIAFAESVCVTRKANNQEAALVYANECLSPWFQEKASEVMGSGVTNKNASVNEQ
AKEFGATTSDEFDQLAFPDFEYIWKNRSDWSQRYNSLF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagagacaaagaactccgcagatcgaaccggcggacgttcctgaaagttggc
ggcgcaagcaccatcggtatggccggcctcgcgggctgcctgaccggcggcggcgacgac
gacgacgacggcggcgacggcggcgacgacaccacgactaccgattcggactccgacaac
ggcggtgacaccacgacggagagcgacgacgcgatggacttcggcggtgcggacctcaac
gtgatgctgaacgtcggggccatcagcaccgtccacaagcaacacctcatcccgcgcgtc
gaggagaagtacaacctcaacatcaacaccaccacggccgtcacaacctcgcagttgacg
caggtgcaggccagccccgacagccccccggacgtcctcattccggacgtcatcggtgtc
gagcgggcgtcccgcgaggagtggctcgaaccgctcaccgaccacacggacctcgtgccg
caggtcgacaacatctacgacaagttcgtccactacgacggggcgggtgcctcgtgggaa
gtcggcgaggtgctcccggtcatcaactcgaacatgtgggactcgacaccgacgtcccac
gccgaggtgatgcagaactcgaactccacagcagtcgtcccgttctcgtggtccggcggc
ccctacctcctgctgatggcctcggccatcgcgaccggtgagccgttcagctcccgactc
gacgtgcaggccggcttcgattggatggaggagaacttcgcgccgaacgtgagttcagag
tacggcggcgtcgcctccgcgaagcagcaactcgccagcgggaacgtcgacagcctgaac
ttgttctgggactacatggtgttcgacatgttccaggacgacgcgccgatcgagacgctg
ttccgcctcgacccgaagggcatcgcgttcgcagagtccgtctgcgtgacccggaaggcg
aacaaccaggaggcggccctcgtctatgccaacgagtgcctgtcgccgtggttccaggag
aaggcctcggaagtgatgggctctggtgtcactaacaagaacgcgtctgtcaacgagcag
gccaaggagttcggagcgaccacctccgacgagttcgaccagctcgcgttcccggacttc
gagtatatctggaagaaccggagcgactggtcccagcggtacaactcgctcttctaa
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