Halophilic archaeon: Halar_1790
Help
Entry
Halar_1790 CDS
T01603
Name
(GenBank) transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hah03000
]
Halar_1790
Transcription factors [BR:
hah03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halar_1790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_20
HTH_IclR
Rrf2
MarR_2
HTH_27
DUF2250
Motif
Other DBs
NCBI-ProteinID:
AEN05505
LinkDB
All DBs
Position
complement(1050689..1051450)
Genome browser
AA seq
253 aa
AA seq
DB search
MANDPVSDADATEALTDLGLSTYGARTFVGLQKLGISTASEVAQVADVPRSQVYGAMEEL
EDLGLVDVQAGSPKRYRPVDVEEARTLLYERLKDEAETAFDYLDSVRGERAGEEGREAIW
TTEGGENITARVTSLVANAESELLYATSDRSLVEGPVADAFEAAAERGVTVTVASADERV
REAAMDAGFRTVTVDAADNPEVGVGRVLVVDGDTVLLSVLPSSEIGDASTESAFWSDGTG
FATILAGLVRERF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaccccgtgagtgacgcagacgccaccgaggcgctgacggatctcggcctc
tcgacgtacggcgcgcgaacgttcgtcgggctccagaagctcggtatctcgacggcgagc
gaagtcgcgcaggtcgcagacgtgcctcgctcacaggtctacggggcgatggaggaactg
gaagatctcgggctcgtcgacgtgcaggccggctcaccaaagcgctaccgcccggtcgac
gtcgaagaggcccgaaccctgctgtatgagcggttgaaagacgaagccgagaccgcgttc
gactacctcgattctgtccggggcgagcgcgcgggcgaggagggccgcgaagccatctgg
acaaccgagggcggcgagaacatcaccgcgcgggtcacctcgcttgtcgccaacgcggag
tcggagctgctctacgcaacgagtgaccggtcgttggtcgaagggcctgtcgcggacgcg
ttcgaagccgcggccgagcgtggggtcacagtcacggtcgcgagtgcggacgaacgggtc
cgggaggcggcgatggacgccggctttcggactgtgacggtcgacgctgctgacaacccc
gaggtcggcgttggtcgggtgctcgtcgtcgacggtgacacggtgttgctgagcgtgctc
ccgagttcggagatcggcgacgccagcacggagtcggcgttctggagcgacggcacgggg
ttcgcgacaatactcgctgggttggtgcgcgagcgcttctga
DBGET
integrated database retrieval system
