KEGG   Halophilic archaeon: Halar_2200
Entry
Halar_2200        CDS       T01603                                 
Name
(GenBank) CRISPR-associated protein Cas4
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
hah  Halophilic archaeon
Pathway
hah03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Halar_2200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hah03032]
    Halar_2200
Enzymes [BR:hah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Halar_2200
DNA replication proteins [BR:hah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Halar_2200
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Halar_2200
SSDB
Motif
Pfam: AAA_12 AAA_11 Dna2 AAA_19 AAA_30 PDDEXK_1 Viral_helicase1 UvrD-helicase ResIII AAA_22 AAA_16 Cas_Cas4 SLFN-g3_helicase bpMoxR UvrD_C_2 Helicase_RecD NPHP3_N AAA AAA_7 AAA_25 PhoH DEAD nSTAND3 Mg_chelatase SRP54
Other DBs
NCBI-ProteinID: AEN05881
LinkDB
Position
1437544..1440321
AA seq 925 aa
MRIRGPIVDVAEPRTVSGGTDLVELTIRPERGTADPVTVTLWNKWTETAEHAEAGMELLV
TEVEEEEFRGETQYNTTPDSWVVLEPAFLVDVTDVRSWVQCPRMYYLNKLSGVPLKYPVV
KGTIVHEVFGDLLRGRGLEESIDQRVSEAGLELGALGYDREEAEDEVRRNAAAIEGWLNQ
GTLTEEDSWRSEYTLISPTFGIKGRADALRRGMPVELKTGKNTKREPRFQDKMQAACYAL
LLEERGVDADTGTLLYTKNTALDRGDETGDLSPAKEFSVGRGLLKFVVRTRNEIAAMEYD
TSIPTGFEAGAKCQYCFEQDTCMVVSGRLDQESKAGQIGQPLPETERDYFEGFYQAVERE
RRETHAEYRKLWEQGAEERAEADRALIDLEPLGREELPGGRWRLRARKPTDAVSKLRDGD
VALASDGDPVQGHAELCRIQSMGEGSADRTGAEDGGKAGAEIVVEADEPVALCRLDVYPS
EISVDRMLTALHDAVLKGNPDRKDILFGRREPEFSGEERQYIDNNDAQNEAVNLATRAEE
FALVHGPPGTGKTYTIARTVRALVEQGNRVLLSAFTNRAVDNALEAVRDQGFEDSAERSS
AGSRTVSGDAVRFGTESGVRADMQDLRLERAGDPGERISELKQAPLVAATTASCGSRIMR
EERFDVAIVDEASQLTEPATLAAINLADRFVLVGDHEQLPPVVRAEGGDSWTPGREGGED
VDLATSLFERLHKQAPAASVMLDRQYRMAQRIQAFSSREFYDGQLRPATPEVAAQQIGDL
PGVDPSKLPEALRDPVAFVDPDGQRVGNTNPTEADRVAELVAQFREAGVAVEDIGVIAPF
RAQVAEISRRTNATVDTVDRFQGSSKEVIIVSFVATGDLSGPIYDDPRRMNVALTRAKKS
LVLVGDADALGAEPFYQRLLAWATR
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgcgaatcagggggcccatcgtcgacgtcgccgagccccgaaccgtcagcggcgggacc
gacctcgtcgagttgaccatccgacccgagcgcgggacggcggacccagtgacggtcacg
ctctggaacaagtggacggagacggccgagcacgccgaagccgggatggagttgctggtg
actgaggtcgaggaagaggagttccgtggcgagacccagtacaacaccactcccgactcg
tgggtggtcctggaaccggcgttcctcgtcgacgtgaccgacgtgcgctcgtgggtccaa
tgcccgcggatgtactatctcaacaaactctccggcgtcccgctgaaataccccgttgtc
aaggggaccatcgtccacgaggtgttcggtgacctccttcggggcagaggactggaagag
tcaattgaccagcgtgtctcggaggcgggcctcgaactcggcgcgttgggctacgaccgc
gaggaggccgaggacgaagtacggcgcaacgccgctgccatcgaagggtggctgaatcag
ggaacactgacagaagaagacagttggcgctcggagtacacgctcatctcgccgacgttc
ggcatcaagggccgggccgacgcgctccgccgtgggatgcccgtcgaactcaagaccggg
aagaacaccaaacgcgagccgcggttccaggacaagatgcaggcggcctgttacgccctc
ctgctggaggaacgcggcgtcgatgccgacaccgggacgctgctctacaccaaaaacact
gcgctcgaccgcggcgacgagacgggtgacctctcgccggccaaggagttctcggtgggt
cgggggctcctgaagttcgtcgtccggacgcggaacgagatcgccgcgatggagtacgac
acctcgattccgacagggttcgaggccggcgccaagtgccagtactgcttcgagcaggac
acctgcatggtcgtctccgggcgcctggaccaagagtccaaagcgggccagattggccag
cccctgcccgagacggagcgagactacttcgagggcttctaccaggctgtcgagcgcgag
cgccgggagacccacgccgagtatcggaagctctgggaacagggcgccgaggagcgggcg
gaggccgaccgggcgcttatcgacctcgaaccgctggggcgggaggaactccccggcggg
cgctggcgactgcgggcgcgcaagcccactgacgcggtctcaaaactccgcgatggcgac
gttgcgctggcgagcgacggcgaccccgtgcagggccatgccgaactctgccggatacag
agcatgggcgaaggctccgcggaccgaacaggcgcggaggacggcgggaaagcgggcgcc
gaaatcgtcgtcgaggccgacgaacccgtagcgctctgtcggctggacgtctacccctcc
gaaatctccgtcgaccggatgctgaccgcgctccacgatgccgtgctgaagggcaacccc
gaccggaaagatatcctgttcggccggcgcgagcctgagttctcgggcgaggaacggcag
tacatcgacaacaacgacgcccagaacgaagcggtcaatctcgcgactcgggcggaggag
tttgcgctcgtccacggaccgccggggacgggcaagacctacactatcgcgcggaccgtt
cgagcgttggtcgagcagggcaacagggtgctactctcggcgttcacgaaccgcgccgtc
gacaacgcgctggaggcggtgcgggaccaggggttcgaggacagcgcggagcggagctcc
gctggcagccggacggtgtccggcgatgcggtccgattcgggaccgaatccggggtcaga
gcggatatgcaggacctccggctggagcgggccggcgaccccggcgagcgcatttcggaa
ctgaagcaggcgccgctggtggcggcgacgacggcttcctgtggctcgcgaatcatgcgc
gaggaacggttcgacgtggccatcgtcgacgaggcctcccagctgaccgagccggcgacg
cttgcggccatcaacctcgccgaccggttcgtgctcgttggcgaccacgaacagctgcca
cccgtcgtgcgggccgagggcggcgactcctggacccccggacgagagggcggtgaggat
gtggacctcgccacctcgctgttcgagcgcctccacaagcaggccccggcggcgtcagtg
atgctggaccgccagtaccggatggcccagcgcattcaggcgttctcctcgcgggagttc
tacgacggccagctccggcccgccacccccgaggtggccgcccagcagatcggcgacctg
cccggcgttgaccccagcaagctccccgaggcgctccgggacccagtcgcgttcgtcgac
ccagacgggcagcgcgtgggcaacaccaaccccacggaggccgaccgcgtggccgaactg
gtcgcgcagtttcgcgaggctggggttgctgtcgaggatatcggcgtcatcgcgccgttc
cgggcacaggtggcggagatttcgcggcggaccaacgccaccgtcgacaccgtggatcgg
ttccagggttccagcaaggaggtcatcatcgtctcgttcgtcgcgacgggtgacctctcg
ggcccgatttacgacgacccacgacggatgaacgtcgcactgacgcgggcgaagaagtcg
ctcgtgctggtcggcgacgccgacgcgctaggcgcggagccgttctaccaacggctgttg
gcgtgggcaacccgttag

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