Halophilic archaeon: Halar_2279
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Entry
Halar_2279 CDS
T01603
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
hah
Halophilic archaeon
Pathway
hah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halar_2279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_2279
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halar_2279
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
HHH_5
HHH
HHH_2
GIY-YIG
UVR
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AEN05952
LinkDB
All DBs
Position
1511181..1512926
Genome browser
AA seq
581 aa
AA seq
DB search
MDASSVRERADALPRDPGIYQFLERDGDTESVLYVGKAVNIRDRVRSYADPRSQRIRKMV
RRADAIDIAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPLVQLTDHAYPRIEITRD
PDDAATVFGPYTRKDAVETVVKALRATYGLRGCSDYKFEGRDRPCLDHEMGLCSAPCVDA
IDEAAYSEDIQSAIRFFEGETGVLAEPLEREMEAAAQQAEFERAANARDRLEVVEAFHGG
GGEAVSSPGHRREVDVLAAVVNGDSATVARLHASGGQLVDRTRHRLDAPEGEDRVATLLS
AFLTQYYAERELPDAILLAERPDDPDVLEWLDAAGVEVSVPGAGREGKLVELALKNARNE
VGRDDEIGALADALSIPRPERIEGFDVSHAHGKAVVGSDVCFVGGSPEKSGYRRKKLTER
NDDYANMRELVRWRAERAIEGRDDRPDPDLLLIDGGEGQLGAALDALAETGWDIPCIGIA
KAEELVITESGVENWNESAPHLHLLQRVRDESHRFAVQYHQSIRDDVKTALDEVSGVGAE
TRKRLLRRFGSVDAVREASEDDLQDVSGVGEKTAERILRRL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagcagtgtgcgtgagcgcgcagatgccctcccgcgtgaccccgggatctac
cagttcctggagcgcgacggtgacacggagtcggtgctctacgtcgggaaagccgtcaac
atccgtgatcgagtgcgctcctacgccgacccacgcagccagcgcatccggaagatggtg
cgccgggccgacgcgatcgacatcgctgtcaccgacaccgagacgcaggcgctgctgctc
gaagcgaacctcatcaagcgccaccagccccgctacaacgtccgactgaaagacgacaaa
tcctacccgcttgtccaactcactgaccacgcctacccacgcatcgagattacccgagac
cccgacgatgcggcgacggtgttcggcccctacacgcggaaggacgccgtcgagacggtg
gtgaaggcgctccgggcgacctacggcctgcggggctgctcggactacaagttcgagggt
cgggaccggccctgtctcgaccacgagatgggcctctgttcggcgccctgcgtcgacgcc
atcgacgaggcggcgtattctgaagatatccagagcgctatccgcttcttcgagggcgag
acgggcgtgctcgccgagccgttggagcgagagatggaagccgccgcacagcaggccgag
ttcgagagagcagcgaacgctcgcgaccgcctggaggtggtcgaggcgttccacggtggc
ggcggtgaagccgtctcctcgccgggccaccgccgcgaggtcgacgtgctcgcggccgtc
gtcaacggcgactcggcaaccgttgcgcgactccacgccagcggcgggcaactggtcgat
cggacccgccaccgccttgacgcgccagagggcgaggaccgcgtcgcaaccctcctctcg
gcgttcctcacccagtactacgccgagcgcgagctccccgacgcaattctcctggccgag
cgcccggacgacccggacgtactcgagtggctggacgctgccggcgtcgaggtctcggtc
ccgggtgccggccgggaagggaaactggtcgagttggcgctcaaaaatgcccgaaacgag
gttgggcgggacgacgaaatcggtgcgctcgccgacgcgctctcgataccccgaccagag
cgaatcgaggggttcgacgtgagtcatgcccacggaaaggccgtcgtcggcagcgacgtg
tgtttcgtgggcgggagtcccgagaagagtgggtatcgacgaaagaagctgaccgagcga
aacgacgactacgccaacatgcgtgaactggtgcgctggcgggccgagcgcgcaatcgag
ggccgtgacgacagacccgacccagacctcctgctcatcgacggtggcgaggggcaactc
ggtgccgcgttggacgcactcgcagagacgggctgggacattccctgtatcggcatcgcg
aaggccgaagaactggtcatcacggaatccggcgtggagaactggaacgagagcgcccca
cacctccacctcctccagcgagtccgcgacgaatcccaccgctttgcagtacagtaccac
cagagcatccgcgacgatgtgaagacggcgctggacgaggtctctggggtgggagcggaa
acgagaaaacgactcctgcggcggtttggctccgtcgacgcggtccgcgaggccagcgag
gatgacctgcaggatgtttcgggcgtgggcgagaagacggccgaacggatcttgcgacgg
ctctga
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