Halophilic archaeon: Halar_2345
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Entry
Halar_2345 CDS
T01603
Name
(GenBank) uracil DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hah
Halophilic archaeon
Pathway
hah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Halar_2345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_2345
Enzymes [BR:
hah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Halar_2345
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Halar_2345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
EccE
DUF383
Motif
Other DBs
NCBI-ProteinID:
AEN06013
LinkDB
All DBs
Position
complement(1582433..1583062)
Genome browser
AA seq
209 aa
AA seq
DB search
MPNVTDRIRNPFGMEPDCEQFVPGYGDANADFHVVGDHPGVHGGVETGVPFTGTAAAERL
QAALREAGLLRTVGDEPEVNRTFLSYLHMCVPEGEVTAAEYADMDRYFDAELRAIAAHVL
LPVGERATRHVLREFTAQAHRTDINMARLHGQELLGSGWLVLPIADPVEWDDDEAERLVE
SLLELQSTDFRRESDLGRFLPGGESYYVR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaacgtcaccgaccgcatccgcaatccgttcgggatggaacccgactgcgagcag
ttcgtcccgggatacggcgacgccaacgccgacttccacgtcgtcggcgaccaccccggc
gtccacggcggcgtcgagactggcgtcccgtttacggggacagctgcggccgaacggctg
caagcggctctccgagaggcaggactgctccgcaccgtgggcgacgagccagaagtcaat
cgaacgtttctctcgtacctccacatgtgcgttcccgagggcgaggtgactgcggccgag
tacgcagatatggaccgctatttcgacgccgaactccgagcaatcgccgcacatgtcttg
ctcccggtcggcgagcgcgcgacccgacacgtcctccgagagttcactgcgcaggcccac
cggacggatatcaacatggcccggcttcacgggcaggagctgctggggagcggctggctc
gtgctccctatcgccgaccccgtggagtgggatgacgacgaagcggaacgacttgtcgag
tcactgctggagctccaatcgactgatttccgtcgcgaaagcgacctcggacggtttctt
cctggtggcgagtcctactacgtacgatag
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integrated database retrieval system
