Halophilic archaeon: Halar_2454
Help
Entry
Halar_2454 CDS
T01603
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hah03000
]
Halar_2454
Transcription factors [BR:
hah03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halar_2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
PAS_4
GAF_3
Response_reg
GAF
PAS_9
PAS
PAS_8
Sigma70_r4
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
AEN06108
LinkDB
All DBs
Position
complement(1681560..1684439)
Genome browser
AA seq
959 aa
AA seq
DB search
MASSPRVLDSSSVLLVGTSEWLTHFAVTLETRTEATVQTVGTKAEALGVFWNQTTDCLIT
EYTLDETTGIELLREIRTETTALPVIVGTASGSEAIASEAIGAGVTDYVALTDSSEQMAE
ELLDRTERAVRSAQRAVTQRERARQFDAIFSDSQTATWVLDPDGSLARVNQTAREMIDED
IETIIGEPFWALPWWSQADATNADVHQLVENAFHGTFGNAVVPQRPHAENPGVIDLSVRP
VENERGELISIVVEGVDITERVDLEQNLRQSEELHRVTLNNMTDTVLMTDEAGEYSYVCP
NVHFIFGYTAAEIHELGTIDELLGENLFDREELAEEGVLKNIECSATDKAGHEHTLLVNV
REVSIQDGTLLFSCRDITKRKQREDALATLQETARDFLYAETHQEIAQHIVDDTPGVLNL
EASAVYLFDADANNLRPAAHSTTMRELYGPLPTVHTDGKTLPGYSFVEDEALYFDDVHEA
DRLDNRATGLRSATYIPLGNHGVFVAGSDQVGVFDDVTRELADLLAATAEAALDRVTRES
RLREQDRTLQHQNEQLTELNRINETIREIDQALVQAETREEIDHTVCELLTADDRFRFAW
IGTVDPTTDTVDPRAWAGIEQGYLDSQSFTVATSDTEPTGETAATGDVTLVSNVAAGLRD
ELWRKDALARDFLSILSIPLVYNDLSHGVLTVYAPTQDAFDDTAKAVLAELGETIASALS
AIERKNALLTTSMTRIEFAIDDPTFVLSRLAQDAACTLSYQGGVQQSTEGSYVFVTVEDA
SLEDVAEVASQLVAIDDVQQISATGEGGVLRLRLTQPFLALELAEHGAVFRKAIASPSTT
TLVIDIPESMDVRTITQLVRETFSTVELRSKQTLDQSIEHNLYSKFLGKLTERQLEVIQT
AYYSGFFESPRENTGEDVAAMLGISPPAFYTHARTVQRKLFETLFEENDPSVPSPAGEV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcacctcgtgttcttgattcatcctctgtcttacttgtcgggacaagtgag
tggctcacacattttgcagtgacgctcgaaacacggactgaggcgactgtacaaacggtt
ggaaccaaagcagaggcactcggtgtcttctggaaccagactactgactgtctcatcacc
gagtacacgctcgatgagacaactggaatcgagctgctcagagagattcgcaccgaaacc
accgcgcttccagtaatagttggcacggcctccggaagtgaagccatcgccagcgaagcc
atcggggccggggttactgattatgtcgcgctgacggactcgtctgaacagatggcagag
gagctgttggatcgaaccgaacgggcggtccgatccgcacagcgggcggtcacccaacgg
gaacgggccagacagttcgatgcgattttcagcgattcacagacggcaacatgggtgctc
gacccggatgggtcactcgcccgggtgaaccagaccgctcgggagatgatcgatgaagat
atcgaaacgatcatcggcgagccattctgggcgcttccgtggtggtcgcaagcggatgcg
acgaacgcagatgtgcaccaactcgtcgagaacgcattccacgggaccttcggtaacgct
gtcgttccacagcggccacacgctgagaatccgggcgtcatcgatctctccgtgcgcccc
gtcgagaacgaacgtggtgagctcatctcaatcgtcgtcgagggcgtcgatatcaccgag
cgcgtcgacctcgaacagaaccttcgccaatccgaggaactccatcgtgtcacgctcaac
aacatgaccgacaccgtcctcatgacggacgaagctggcgagtactcctacgtctgtccc
aacgtgcacttcatcttcggctacacggccgcggagattcatgaattaggcacgatcgac
gagctcctcggcgagaacctctttgaccgtgaagaactcgccgaagagggcgtcctcaag
aacatcgagtgctcggcgaccgacaaggctgggcacgagcacacgctcctggtcaacgtt
cgagaagtctcgattcaagacgggacactcctcttcagctgtcgagatattacgaaacgg
aaacaacgcgaggacgcgctggcaacgctccaggaaaccgctcgtgatttcctgtacgcc
gaaactcaccaggaaatcgcacaacacatcgtcgacgacacacccggcgtcctcaatctc
gaggccagtgcggtctatctcttcgatgctgatgctaacaacctccgccctgcagcacat
tcgacgacgatgagagaactgtatgggccgctcccgactgtccacaccgacggcaaaacc
cttccgggctacagcttcgtcgaggacgaggcactgtattttgatgacgtccacgaggca
gaccgactcgacaaccgagcaacgggtctccggagtgcaacctacatccccctcggcaac
cacggcgtgttcgtcgctggctcggaccaggtcggtgtcttcgacgacgtcacccgggaa
cttgctgatctcctcgcagctacggccgaagcggctcttgaccgcgtcacgcgggagtca
cgactccgtgaacaagatcgcacactccaacaccaaaacgaacagctcaccgaattgaat
cgcatcaatgagacgattcgagaaatcgatcaagcactggtccaagctgaaacgcgagaa
gagatcgaccataccgtctgtgaactactgaccgctgacgaccggttcaggtttgcctgg
atcgggacagttgacccgacgactgataccgtcgacccacgagcatgggcaggaatcgaa
cagggatatctggatagtcagtcgtttactgtcgctacgtcagatacagaacccacgggg
gaaactgccgcgactggtgatgtgacgctggtgtcgaacgttgcagctgggcttcgtgac
gaactgtggcgcaaggatgccctcgcccgtgatttcctctcgatattgagtatcccgctc
gtgtataatgacctctcacacggcgttttgacggtctacgcaccgactcaagacgcgttc
gacgacacagcgaaggccgtcctggctgaactcggggaaaccatcgcgtccgccctcagt
gcaatcgaacggaagaacgcgctcctcacaacatcaatgacgcgcatcgagttcgctatt
gacgaccccacgttcgtcctctcacgtcttgcgcaggacgcagcgtgtacgctctcgtat
cagggtggggtccagcaatccaccgaggggagttacgtgttcgtcactgtcgaagatgcc
tctctggaagacgtcgccgaagtagcatcacagctcgtcgcaatcgacgacgtacaacag
attagtgcaactggtgagggtggcgttttgcggctgcggctcacacaaccgttccttgcg
ttagagctagcagagcatggtgccgtcttccgcaaagcgatcgcaagtccatccaccaca
acgctcgtcatcgatatcccggaaagcatggacgtccgaaccatcacgcaactcgtccgt
gagacgttctccacggtcgaactccgttcgaagcagacgctcgatcagtcgatagaacac
aatttgtactcgaagttccttgggaaactaactgagcgtcaacttgaggtgattcagacg
gcgtactacagtggcttcttcgaatcaccacgcgagaacactggcgaagatgttgcggca
atgctcgggatctccccgcccgcgttctatacgcacgcccggactgtccagcgcaaattg
tttgagacactcttcgaagagaacgacccttccgtcccttctcctgccggagaggtttga
DBGET
integrated database retrieval system
