KEGG   Halophilic archaeon: Halar_2520
Entry
Halar_2520        CDS       T01603                                 
Name
(GenBank) Transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
hah  Halophilic archaeon
Pathway
hah03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Halar_2520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hah03021]
    Halar_2520
Transcription machinery [BR:hah03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Halar_2520
 Prokaryotic type
  Archaeal type
    TFE
     Halar_2520
SSDB
Motif
Pfam: TFIIE_alpha HypA DUF7129 Zn_ribbon_6 Zn_Ribbon_TF DNA_ligase_ZBD Zn_ribbon_LysW Zn_ribbon_TFIIB DUF7560 SF3A2 Zn_ribbon_8 MobI
Other DBs
NCBI-ProteinID: AEN06174
LinkDB
Position
1736865..1737395
AA seq 176 aa
MAFDGLLEDPVIQKYLHDLVGPRGMPVAAAPPDGEVTDEELSETLDLELNDVRRALFILY
ENDLAEYRRVRDEDSGWLTYLWTFHYENIPDNLEEEMFRLADALEQRLEYESEHQFYLCE
GCSLRFEFEEAMEFGFECPECGTQLESMENTGMVEATEQRLAEIREELNIESEVEA
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcttttgatggacttttggaggatccagtcatccaaaaatacctccacgatctggtc
ggcccgcgagggatgcccgtcgccgcggcgccgcccgacggtgaagtgacggacgaggag
ctgtccgagacgctcgatctcgagctcaacgacgtccgccgtgcgcttttcatcctctac
gagaacgacctggcggagtatcgccgggtgcgcgacgaggattcggggtggctcacctac
ctttggacgttccactacgagaacatccccgacaacctcgaagaggaaatgttccgcctt
gccgacgcgctcgaacagcgcctcgagtacgagagcgagcaccagttctacctgtgtgag
ggctgctcgcttcgcttcgagttcgaggaggcgatggagttcggcttcgagtgtcccgag
tgtggcacccaactcgagtcgatggagaacaccgggatggtcgaggctactgaacagcgt
ctcgcggagatccgggaggagctcaacatcgagtccgaggttgaggcctaa

DBGET integrated database retrieval system