Halophilic archaeon: Halar_2520
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Entry
Halar_2520 CDS
T01603
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hah
Halophilic archaeon
Pathway
hah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halar_2520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hah03021
]
Halar_2520
Transcription machinery [BR:
hah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Halar_2520
Prokaryotic type
Archaeal type
TFE
Halar_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HypA
DUF7129
Zn_ribbon_6
Zn_Ribbon_TF
DNA_ligase_ZBD
Zn_ribbon_LysW
Zn_ribbon_TFIIB
DUF7560
SF3A2
Zn_ribbon_8
MobI
Motif
Other DBs
NCBI-ProteinID:
AEN06174
LinkDB
All DBs
Position
1736865..1737395
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AA seq
176 aa
AA seq
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MAFDGLLEDPVIQKYLHDLVGPRGMPVAAAPPDGEVTDEELSETLDLELNDVRRALFILY
ENDLAEYRRVRDEDSGWLTYLWTFHYENIPDNLEEEMFRLADALEQRLEYESEHQFYLCE
GCSLRFEFEEAMEFGFECPECGTQLESMENTGMVEATEQRLAEIREELNIESEVEA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgatggacttttggaggatccagtcatccaaaaatacctccacgatctggtc
ggcccgcgagggatgcccgtcgccgcggcgccgcccgacggtgaagtgacggacgaggag
ctgtccgagacgctcgatctcgagctcaacgacgtccgccgtgcgcttttcatcctctac
gagaacgacctggcggagtatcgccgggtgcgcgacgaggattcggggtggctcacctac
ctttggacgttccactacgagaacatccccgacaacctcgaagaggaaatgttccgcctt
gccgacgcgctcgaacagcgcctcgagtacgagagcgagcaccagttctacctgtgtgag
ggctgctcgcttcgcttcgagttcgaggaggcgatggagttcggcttcgagtgtcccgag
tgtggcacccaactcgagtcgatggagaacaccgggatggtcgaggctactgaacagcgt
ctcgcggagatccgggaggagctcaacatcgagtccgaggttgaggcctaa
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integrated database retrieval system