Halophilic archaeon: Halar_2665
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Entry
Halar_2665 CDS
T01603
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hah
Halophilic archaeon
Pathway
hah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Halar_2665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_2665
Enzymes [BR:
hah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Halar_2665
DNA repair and recombination proteins [BR:
hah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Halar_2665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
AEN06312
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All DBs
Position
1882377..1883384
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AA seq
335 aa
AA seq
DB search
MEFGEISLSALDGPFDLQSTLESGQSYLWERADGGTYTDLAAHGGNAWYETVLPATTGLT
DQPTLLRVRQRGGVDDGALEWEAGGVLEGSTTPSDPADGEALLTHLLRLDDDLETIYEVT
MDEPLVREAVERYPGLRLTRDPPFGCLVSFICSAQMRVARIFGMQQSLREAYGEPVTVDG
RTVHAYPTPEALAERSEDDLRGLSLGYRAPYVQRTAEMVAEGEANPEDARGLPYEEAREY
LTKFVGVGDKVADCVLLFSLGYLQAIPLDTWIQTVISDYFPECEGGNYAETSQAIRERLG
AGLPERDEVFGESGPDAYAGYAQTYVFHFLRTGEN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggcgagatttcgctctccgcgcttgacggcccgttcgatctccaatcgaca
ctcgagagtgggcagagctatctctgggagcgcgccgacggcgggacatacactgacctc
gctgcccacggcggcaacgcgtggtacgagacggtcctcccggcgactacagggctgact
gaccagcccacactgctgcgcgtgcgccagcgcggtggcgtcgatgatggggcactggag
tgggaagccggcggcgttctggaggggtccacgacccccagtgacccggccgatggcgag
gcactgctcacgcacttgctacggctggacgacgatctcgagacgatctacgaggtgacg
atggacgaaccgctggtcagagaagctgttgagcggtaccccggcctgcggctcacccgt
gacccgccgtttgggtgtctggtctcgttcatctgttcggcccagatgcgagtcgcccgg
attttcgggatgcagcagtcgctgcgcgaggcgtacggtgagccagtcacggtcgacggg
cggaccgtccacgcctatccgacaccggaagccctcgccgagcgctccgaagacgacctg
cgagggctgagtctgggctaccgcgcaccctacgtccagcgcaccgcggagatggtcgct
gagggggaggcgaacccggaagacgcgcgcggactgccgtacgaggaggcccgcgagtat
ctcacgaagttcgtgggcgtcggcgacaaagtggccgactgcgtgctgctgttctcgctc
ggctacctgcaggcgatcccgctcgacacctggattcagaccgtcatcagcgactacttc
ccagagtgtgagggcggcaactacgctgagacctcgcaggccattcgtgagcgactgggt
gccggactgcctgaacgagacgaggtattcggcgagagcggccccgacgcctacgctggc
tacgcccagacctacgtgttccatttcctcagaacgggtgaaaattaa
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