Halophilic archaeon: Halar_2687
Help
Entry
Halar_2687 CDS
T01603
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hah03016
]
Halar_2687
Enzymes [BR:
hah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Halar_2687
Transfer RNA biogenesis [BR:
hah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halar_2687
Prokaryotic type
Halar_2687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEN06332
LinkDB
All DBs
Position
complement(1909594..1910406)
Genome browser
AA seq
270 aa
AA seq
DB search
MRAYRLAYDGRPYYGYQRQPDVPTVEDTLFAGLEAIGVLEDADQKPPNYAAAGRTDAGVS
AVAQTVAFDAPEWCTPGAVNAELPGSVRAWAAAAVDGDFHPTRDPVQRTYVYHLHAPDAD
DSAASAAASALSGKHDYHNFTSDDHRTVREVSATVERDGEFLAVEVSAGGFPRGFVRRFI
GVLFEIAVEGAPLSRAEEALGEESLQGGRGIPRLSPEPLVLTGVAYPNLEFTVDEQAATS
AREVFEERRVGGLERARVASSVLSGLSSPN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctaccggctagcctacgacgggcgaccgtactacggctaccagcgccagccg
gacgtcccgaccgtcgaggacacgctgttcgccggcctcgaagccatcggcgtgctcgag
gacgccgaccagaaaccgccgaactacgcggcggcaggccggaccgatgctggagtgtcg
gccgtggcccagaccgtcgcgttcgacgcgccggagtggtgtacccccggagcggtcaac
gcggagctccctggctcggttcgggcgtgggcggccgcagctgtcgacggcgacttccac
ccgactcgcgatccagtccagcggacgtacgtctaccacctccacgcgcccgacgccgac
gattcggcggccagcgccgcggccagcgcgctctctggaaaacacgactaccacaacttc
accagcgacgaccaccggaccgtccgggaggtctcggcaacggtcgagcgcgacggggaa
ttcctcgccgtcgaggtgtccgcgggtgggttccccagagggttcgtccgtcggttcatc
ggcgtcctgttcgagattgccgtcgagggggcgccgctctcccgcgccgaggaagcactg
ggcgaggagtcgctgcagggtgggagaggcatcccgcggctatcgcccgaaccgctggtg
ctgactggcgtggcgtatcccaatctggagttcactgtggacgaacaggcggccacgagc
gcacgcgaggtgttcgaggaacgccgcgtcggtggactggagcgggcgcgagtggcgtcg
tcggtcctgtccgggctctcgtcgccgaactaa
DBGET
integrated database retrieval system
