Halophilic archaeon: Halar_2844
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Entry
Halar_2844 CDS
T01603
Name
(GenBank) DNA topoisomerase type IA zn finger domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hah03032
]
Halar_2844
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_2844
Enzymes [BR:
hah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halar_2844
DNA replication proteins [BR:
hah03032
]
Prokaryotic type
DNA Topoisomerases
Halar_2844
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halar_2844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
Auto_anti-p27
NucS_N
Zn_ribbon_6
HypA
Zn_ribbon_recom
Amelotin
HMBD
Zn_ribbon_LysW
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AEN06476
LinkDB
All DBs
Position
complement(2054997..2055782)
Genome browser
AA seq
261 aa
AA seq
DB search
MTGPPRHVTKTVRLFAGDCTVTFEGERDRTQRGYVLVVVKPDRTVLVHDAAGYQPVAWLT
RADEVTTETEDDSFSVTATAGDQRLHVVSAATVGQRELRISEAGAPVGSCPDCGDALVRT
GGDVVCLGCDERYGLPAGATVLEESCPDCGLPTMRVERGEELELCLDWRCESLADAVADV
LDGRWDCPDCGEPLGVVNRGNRPFLGCDAYPACETTFSIPAGVAVGECSCGLPVFETAAG
RRCLDGTCDRFRDHVETHDGP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaccaccccggcacgtgaccaaaacagtacgactgttcgcaggcgactgcacc
gtcacgttcgagggcgagcgcgaccggactcagcgcggctacgtgctggtggtcgtcaaa
cccgaccgcaccgtgctagtccacgacgccgccggctaccagccagtcgcgtggctcacc
cgggctgacgaggtgacgaccgaaaccgaagacgactcgttctcagtgaccgccaccgcg
ggcgaccaacggctccacgtcgtttctgcggcgacggtgggccagcgcgaactccggatc
tccgaggcgggggcgccggtcggttcgtgtccggactgcggcgacgcgctcgtccgcacg
ggtggcgacgtggtctgtctgggctgtgacgagcgctacggcctcccggcgggggcgacg
gtgctcgaagagtcgtgtccggactgcgggctcccgacgatgcgggtcgaacgcggtgag
gaactggagctctgtctggactggcgctgtgaatcgctggccgacgcggtcgctgacgtg
ctcgacggccgctgggactgtccggactgcggcgagcccctgggcgtcgtgaaccgcggg
aatcggcccttcctggggtgtgatgcctaccctgcgtgcgagacgacgttctctatcccc
gcgggcgtggccgttggtgagtgttcgtgtggactgcccgtgttcgagacggctgcaggg
cggcgctgtctcgacgggacctgcgaccggttccgtgaccacgtcgagacacacgacggt
ccctga
DBGET
integrated database retrieval system
