Halophilic archaeon: Halar_2898
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Entry
Halar_2898 CDS
T01603
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hah
Halophilic archaeon
Pathway
hah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halar_2898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hah03021
]
Halar_2898
Transcription machinery [BR:
hah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halar_2898
Prokaryotic type
Archaeal type
TFB
Halar_2898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
zf_Rg
DZR_2
Zn_ribbon_RPB9
Cyclin_N
DZR
Trm112p
DUF7129
Zn_ribbon_tTFIIB
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AEN06529
LinkDB
All DBs
Position
2105394..2106368
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AA seq
324 aa
AA seq
DB search
MTTNTTHRETEAERVEDESEELCPECGGALHNDEAQAETVCNDCGLVVEEDAIDRGPEWR
AFDSSEKDKKSRVGAPTTKMMHDDGLSTNIGWQNKDAYGNSLSASQRQKMQRLRTWNERF
RTRDHKERNLKQALGEIDRMASALGLPENVRETASVIYRRALAEDLLPGRSIEGIATASL
HAAARMGNVPRSLDEMAAVSRVDQATFKRAYRYIVRELSLEVQPADPLEYLPRFASELEL
SDETEHRARELLETAKRQNVHSGKSPVGLAAAAIYAAGVLCNDALTQTEVSDVTDMSEVT
IRNRYQELLQAAENEAASPASTAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacacaacccaccgagaaaccgaggcggagcgagtcgaggacgagagcgag
gagctctgcccggagtgtggtggggccctccacaacgacgaagcacaggcggagacggtc
tgtaacgactgcggcctcgtcgtcgaggaagacgccatcgaccgtggtccggagtggcgc
gcattcgactccagcgagaaggacaaaaagtcccgtgtcggcgccccgaccacgaagatg
atgcacgacgacgggctgtcgaccaacatcggctggcagaacaaggacgcctacggcaac
tcgctgtcggcgagccagcgccagaaaatgcagcggctgcgcacctggaacgagcgattc
cgcacccgggaccacaaggagcgcaacctcaagcaggcgctgggtgaaatcgaccggatg
gcctccgcgctcggcctgcccgagaacgttcgcgagacggcgtcggttatctaccgccgc
gcactcgcggaggatctcctcccgggccgctccatcgagggcatcgccacggccagcctc
cacgctgcagcccggatggggaacgtcccccgcagcctcgacgagatggctgccgtctcc
cgtgtcgaccaggccacgttcaaacgggcctaccgctacatcgtccgggagctctccctc
gaagtccagcccgcggaccccctcgagtatctcccgcggttcgcgagcgaactcgagctt
tctgacgaaaccgagcaccgggcccgcgaactgctcgagacggccaagcgccagaacgtc
cactccggcaaatcgccggtcggcctcgcggccgccgcgatctacgccgcgggcgtcctc
tgtaacgacgcgctcacccagaccgaagtcagcgacgtgaccgacatgagtgaggtcacc
atccggaaccgctatcaggagctgctccaggccgccgagaacgaggcagcgtcgccggcc
agcacggcggcctga
DBGET
integrated database retrieval system
