Halophilic archaeon: Halar_2926
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Entry
Halar_2926 CDS
T01603
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hah
Halophilic archaeon
Pathway
hah03022
Basal transcription factors
hah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halar_2926
09124 Replication and repair
03420 Nucleotide excision repair
Halar_2926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hah03021
]
Halar_2926
03036 Chromosome and associated proteins [BR:
hah03036
]
Halar_2926
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_2926
Enzymes [BR:
hah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Halar_2926
Transcription machinery [BR:
hah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Halar_2926
Chromosome and associated proteins [BR:
hah03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Halar_2926
DNA repair and recombination proteins [BR:
hah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Halar_2926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
Zot
ATPase
AAA_34
nSTAND3
GvpD_P-loop
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AEN06556
LinkDB
All DBs
Position
2135479..2137638
Genome browser
AA seq
719 aa
AA seq
DB search
MAETTRRFFPYESPYPNQGEAMERIAAALGDGDDVLFEGAPGTGKTLSALVPALEHAREE
DRTVVITTNVHQQMRQFVEEARAINDEEPLRAVVFKGKSSMCHIDVEYQECQTLRDTTRE
HVEDRAEKQELKQQQRELLDASREGDAAAAERREAVMDELADVEDRLEETETANICDHYR
NNLLGDNQEFYDWLYDGVRTPEEIYEYADQQGLCGYELLKEGMEAVDLVVCNYHHLLDPN
IREQFFRWLDRDPERVVTVFDEAHNIESAARDHASRSLTENTLDSALSELDDEDDSRAEA
AENVLGAFRDALVDTYEDGFAFGEREQVDENWHDIPVANDNSRDDLTLAFLQQYEGSGIN
TEIELAIQLGEAIDETYEEAYKNGEATSRAESQTLAAARFLATWMDENAEFGQHPMVSAR
RDAGTDELYGRAELYTCIPRRVTKELFDEVYASVLMSATLRPFDVAADVLGLEDPVTMAY
GLAYPDDRRRTYTARTPALFANDRGDPEVQQSVTELVSDLITFTPGNTLVFFPSYAEAER
YHERLDGNQDPKLRLDSSEMETESLRQRFVESEDAALFTSLWGTLAEGVSFDGDDARTVA
VIGVPYPHLDDRLEAVQDAYDRAYSGRRKAGWRYAVEIPTIRKTRQAMGRVIRSPDDFGV
RVLADKRYTRAAMGRYSVRDSFPEEEREELIDMNPKKLKFGMLNFYGDMGAYDGDPPSP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacgacgcgccggttcttcccgtacgaaagcccctaccccaaccagggcgag
gcgatggagcgcatcgccgccgcgctgggcgacggcgacgacgtactgtttgagggggcc
ccagggaccggcaaaacgctctcggcgctggtgccggcgctggaacacgcccgcgaagaa
gatcggacggtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtcgaggag
gcccgcgccatcaacgacgaggaacccctgcgcgcagtggtgttcaaggggaaatcctcg
atgtgccatatcgacgtggagtaccaggagtgccagacgctgcgggacaccacccgcgaa
cacgtcgaggaccgcgcggagaaacaggaactcaaacagcaacagcgcgaactgttagac
gccagccgcgagggcgacgccgccgccgccgagcgccgtgaagccgtgatggacgaactg
gcggacgtcgaggatcgcctcgaagagaccgagacggcgaacatctgcgaccactaccgg
aacaacctgctcggcgataatcaggagttctacgactggctctatgacggggtgcgcacg
ccagaggagatctatgagtacgccgaccagcaggggctctgtggctacgaactgctgaaa
gaggggatggaggcggtcgatcttgtggtctgtaactaccatcacttgctcgaccccaac
atccgcgagcagttcttccgctggctcgaccgcgaccccgagcgcgtggtgacggtgttc
gacgaggcccacaacatcgagtctgcggcccgcgaccacgccagccgcagtctcaccgag
aacaccctcgacagcgcgctcagcgaactcgacgacgaggacgactcccgcgccgaggcc
gccgaaaacgtgctgggggcgttccgagacgcgctggtcgacacctacgaggacggcttc
gccttcggcgaacgcgagcaggtcgacgagaactggcacgatatccccgtcgccaacgac
aactcacgcgacgatctgacgcttgcgttcctccagcagtacgaaggcagtggcatcaac
acggaaatcgaactcgcgatccaactcggcgaggccatcgacgagacctacgaggaggcg
tacaagaacggcgaggccacatcccgtgcggagagccagacactggcggccgcccgattc
ctcgcgacgtggatggacgagaacgccgaattcggccagcacccgatggtctccgcgcgg
cgggatgcaggcactgacgagctgtacggccgggcggagctctacacctgcatcccccgc
cgggtcacgaaggagctgttcgacgaggtgtacgcaagcgtcctgatgtctgcgaccctc
cgacccttcgacgtggctgctgacgtgttggggttggaggaccccgtgacgatggcgtac
ggcctcgcctacccggatgatcgccgccggacctatacggcgcgcacccccgcgctgttc
gcgaacgaccggggcgacccggaggtccagcagtcggtgacggagctggtctcggacctc
atcacgttcaccccagggaacacgctggtgttcttcccctcctacgccgaggccgagcgc
taccacgaacggttggacgggaatcaggacccgaagctgcgactggatagctcggagatg
gagaccgagagtctccgccagcggttcgtcgagagcgaggatgcggcgctgtttacctcg
ctttggggcacgctcgcggaaggggtgagcttcgacggcgatgacgcccggacggtggca
gtcatcggcgtcccctacccgcatctggacgaccggctggaggctgtgcaggacgcctac
gaccgcgcctacagcgggcggcggaaggcgggctggcgctatgcggtcgagattccgacg
attcgaaagacacgccaggcgatgggccgggtgattcgctcgcctgacgatttcggggtg
cgggtgctcgctgataagcggtacacgcgggcggctatgggccggtactcggtccgggac
tcgttcccggaagaggagcgcgaggaactcatcgacatgaacccgaagaagctgaagttc
gggatgctgaacttctacggcgatatgggcgcctacgacggcgacccacccagtccgtga
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integrated database retrieval system
