Halophilic archaeon: Halar_3121
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Entry
Halar_3121 CDS
T01603
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K11071
spermidine/putrescine transport system permease protein
Organism
hah
Halophilic archaeon
Pathway
hah02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Halar_3121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hah02000
]
Halar_3121
Transporters [BR:
hah02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Halar_3121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AEN06741
LinkDB
All DBs
Position
complement(2328272..2329288)
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AA seq
338 aa
AA seq
DB search
MVNQYDSTDDTGGERSLLERFRSHPYSGLAVNAGPAAFWLSIFFLVPLAVMFVYSFGERG
AFGQVLLGLDQLGLQNYQTFFIPEGMSILQTLWVTVAWFLEWVTPTTFHLTDAEPTAYVQ
LTIRSIWYGIIATLVCVAVGYPAAYYVAKLAPERHRNLLLALIVLPYWASYLVRIYAVKL
LLARNGIVPSLIGALPFVSEPPSLLYNNFSVEFGLIYIWLPFMILPAYASIEQIDFTMQE
AAMDLGADRLDAFLRVTFPLSLPGVVAGSILVFIPSVGAYVIPELLGGPNNATIGRFIAS
QFGAAGNWPLGAAASFVLMAIMMGSIWIYLKRAGGGLA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatcaatacgactcgactgacgacactgggggggaacgctcgctgctcgagcgg
ttcaggagccatccgtactcggggctcgcggtcaacgccggcccggcggcgttctggctc
tcgatcttcttcctcgtcccgctcgcggtgatgttcgtctacagcttcggggaacggggg
gcgttcggccaagtgctcctcgggctggaccagctggggctccagaactaccagactttc
ttcatcccggaggggatgtcgatactgcagacgctctgggtaaccgtcgcgtggttcctc
gagtgggtgacgccaacgacgttccacctgaccgacgccgagccgacggcctacgtccaa
ctcaccattcggagcatctggtacggcattatcgcgacgctggtctgtgtcgccgtcggc
tacccggcggcctactacgtcgccaaactcgcccccgagcgccaccggaatctgttgctc
gcgctcatcgtgctgccctactgggcctcctacctcgtgcgcatctacgcggtgaaactg
ctgctcgcgagaaacggcatcgtcccctcgctcatcggggcgctcccgttcgtctcggag
ccgccgtcactgctgtacaacaacttctcggtggagttcggcctcatctacatctggctc
ccgttcatgattctccccgcgtacgcgagcatcgagcagatcgacttcacgatgcaggag
gccgcgatggatctgggcgccgaccgcctcgatgcgttcctccgggtgacgttcccgctc
tcgctgccgggcgtcgtcgccggcagcatcctggtgttcatccccagcgtgggcgcctac
gtcatccccgaactgctgggcgggccgaacaacgccaccatcgggcggttcatcgcctcc
cagttcggggcggccggtaactggccactcggggcggccgcgagcttcgtcctcatggcc
atcatgatggggagcatttggatctacctcaagcgtgccggaggtgggctcgcatga
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