Halophilic archaeon: Halar_3529
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Entry
Halar_3529 CDS
T01603
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hah03000
]
Halar_3529
Transcription factors [BR:
hah03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Halar_3529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_11
HTH_20
HTH_AsnC-type
HTH_5
HTH_IclR
DUF7342
HTH_DeoR
MarR
Fe_dep_repress
MarR_2
HTH_23
TrmB
Rrf2
GntR
HTH_29
HTH_Crp_2
HTH_6
HTH_36
HP0268
FaeA
HTH_28
DUF7343
HTH_45
HTH_10
HTH_Tnp_1
TetR_N
HTH_Cmi2_C
MerR
LacI
HTH_1
HTH_17
AsnC_trans_reg_3
RPA_C
HTH_47
MCM_C
TFIIE_alpha
HTH_PafC
Sigma70_r4_2
Phage_sheath_1C
DUF4143
EAP30
HTH_Tnp_ISL3
Tai4
HTH_69
HTH_7
TnsD
UPF0122
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AEN07123
LinkDB
All DBs
Position
2729336..2729764
Genome browser
AA seq
142 aa
AA seq
DB search
MSTSATVDRILQILEKDAQASVSEIAERADVSKPTVRKYIRQLEDDGVIVGYSADVDPKK
LTGQSIALVGMDVASEQYVDATNALKDLDALESLYSSSGDHMLLAEVRAGDGDELGRVIN
EQILTIDGVTAAHPCFLQERLK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtcggctacggtagaccgtatcctccagatcctcgagaaagacgcccaagcg
tcggtctcggagattgccgagcgggccgacgtgtcgaaaccgaccgtccggaagtatatc
cgccaactcgaagacgacggcgtcatcgtcggctactcggcagacgtagaccccaagaaa
ctcactggccagtcgattgccctcgtcggaatggacgtggccagcgagcagtacgtcgac
gcgacgaacgcgctgaaagacctcgacgcactcgagtcgctctacagttcctcaggcgac
cacatgctgctcgcggaggtgcgcgccggcgacggcgacgaactcggacgggtcatcaac
gaacaaattctgactatcgacggcgtcacggcggctcacccctgcttcctgcaggaacga
ctgaagtaa
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