Halophilic archaeon: Halar_3642
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Entry
Halar_3642 CDS
T01603
Name
(GenBank) transcriptional regulator, MarR family
KO
K07730
putative transcriptional regulator
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hah03000
]
Halar_3642
Transcription factors [BR:
hah03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halar_3642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
HTH_Crp_2
HVO_A0261_N
HTH_11
HTH_20
HTH_IclR
HTH_27
HTH_45
HVO_A0114
SMC_ScpB
Fe_dep_repress
HTH_13
HTH_5
DUF7343
WHD_RNase_R
HTH_Cmi2_C
Mnd1
Rrf2
TrmB
GntR
AbiEi_4
LexA_DNA_bind
RdfA
HTH_AsnC-type
DUF4364
FaeA
TetR_C_7
Mrr_N
HemN_C
HTH_69
Rio2_N
HTH_23
NirdL-like_HTH
HTH_3
Dimerisation
CggR_N
Motif
Other DBs
NCBI-ProteinID:
AEN07221
LinkDB
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Position
2821186..2821965
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AA seq
259 aa
AA seq
DB search
MSDALADKRTASRFRILAEIAERQPAVSQGEIADAVGVTSQAVSEYIRELTEDGLVEKEG
RSRYRVTKEGVDWLFQEAKSLRRYVDHVTEDTLETLQEEAAIATEPIAAGETVSLSLREG
LLHATPGEDGPATGVGTTDAEAGTDVGVTGFEGVIDMDPGTVTVYRVPPVRNGGSRGVDE
QELRSATADADLVLASGVEAAVALRRVESPPTVTAAAGEVAADAAARGMDSLVAVTRDEV
GRVTDALRDGEIEYVVEGA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgctggcggacaaacgcaccgcgagccggttccgcatcctcgcagagatt
gccgagcgccagccggcggtgagccagggggagatcgccgacgccgtcggcgtcaccagc
caggcggtcagcgagtatatccgcgaactcaccgaggacggactggtcgagaaggagggc
cgctcgcgctaccgcgtgaccaaggaaggcgtcgactggctcttccaggaggccaaatca
ctgcgccggtacgtcgaccacgtcaccgaggacaccctcgagacgctgcaggaggaggcc
gctatcgccaccgaaccgattgctgcgggggagacggtctcgctctcgctccgagagggg
ttgctccacgccaccccgggcgaggatggccccgcaacaggtgttgggacgacggacgcc
gaggccggcacagatgttggcgtcacgggcttcgagggcgtcatcgacatggatccgggt
acggtgacggtctaccgcgtcccgccggtcagaaacggcggcagccgcggcgtcgacgag
caggaactgcggtcggcgaccgccgatgctgacctcgtactcgccagcggggtcgaagcc
gccgtggcgctacgccgagtcgagtcaccgccgacagtcaccgccgcggcgggcgaagtg
gccgccgacgccgcagctcgtgggatggattcgttggtcgcggtcacccgcgacgaagtg
ggtcgagtgactgatgcgctccgggacggtgaaatcgagtacgtcgtcgaaggcgcctga
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