Halophilic archaeon: Halar_3688
Help
Entry
Halar_3688 CDS
T01603
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hah
Halophilic archaeon
Pathway
hah03420
Nucleotide excision repair
hah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halar_3688
03430 Mismatch repair
Halar_3688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_3688
Enzymes [BR:
hah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halar_3688
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halar_3688
MMR (mismatch excision repair)
Other MMR factors
Halar_3688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_11
Herpes_ori_bp
AAA_12
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AEN07262
LinkDB
All DBs
Position
2864009..2865886
Genome browser
AA seq
625 aa
AA seq
DB search
MTETDPHVTRLFGGPGSGKTTALLDRVEELIEEPDVSVRDILVVSYTRAAAAEIRERLAE
RIDTTPRALQGNVATMHAKAYELLDLSRGDVVGESDKEEFCDQFGIEYEDEKSGAGRRTA
RSTTLGNKVIATSQWLQRTNREVSDWYDVPFQWDVEEVRLPPDIDPNAQEGNKYTPTWSS
DDERLDIPEAIRGWRNYKGEEEIVGFADMLERVAQRSLQPGVDYLIIDEFQDITTLQSRV
YEEWKPHLKKALIAGDDDQVVYAWQGADPDLLLDEEVDEDVVLPNSYRLPSRVLNVVNKE
IRHIKKRQEKDLRPRKEGGSVEAVSSPSMLDLVRNVRNTIQDENKCADEDREGSVMLLFR
ARYQMFDFVDEFIKEGIPFSSLTDQRLWTDRLTDYVRAIEAIEADERMTALQARRLADIL
QDSAFGGGDRDDLYDLIDDVEDTHAEDDLAAIPIAPDAVDDTVPFMPEPEAAADMARKIT
SFQRKSIAAYFDGDYEGMDPDRVRVGTIHSAKGREADHVFMATDLTEKVVEQMAAQAAQQ
GIETPGEEEFTKTTNPVPVLTDNERRVFYVGMSRARERLVLMENLVSGAPTLPISVLLFN
ELREGEPMDHIDEVQAELEAPEPEP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacggacccccacgtcacccgcctgttcggtggccctggtagcgggaagacg
accgccctgctcgaccgggtggaagaactaatcgaggaacccgatgtgagtgttcgggat
attctcgtggtttcctacacccgcgcggcggcggccgagatccgcgaacggctggccgaa
cgcatcgacaccaccccccgagcgctgcaggggaacgtcgcgacgatgcacgcgaaagct
tacgaactgctcgacctctcccgcggcgacgtggtcggcgagagcgacaaggaggagttc
tgtgaccagttcggcatcgagtacgaggacgagaaatccggcgccggccgccgcaccgcg
cggtcgacgacgctgggcaacaaagtcatcgccacctcccagtggctccagcgcaccaat
cgcgaggtgagcgactggtacgacgtgccgttccagtgggacgtcgaagaggtccgcctg
ccgccggatatcgacccgaacgcacaagagggcaacaagtatacgccgacgtggtcctcg
gacgacgagcgcctcgacatccccgaggcaatccgtggctggcgcaactacaagggtgag
gaggagatcgtcggcttcgcggacatgctcgaacgcgtcgcccagcgctccctccagccg
ggcgtcgactacctcatcatcgacgagtttcaggacatcacgacgctccagtcgcgggtg
tacgaggagtggaaaccccacctgaagaaggccctcatcgccggcgacgacgaccaggtc
gtttacgcctggcagggtgccgaccctgacctgctgctcgacgaggaggtcgacgaggac
gtggtactgccgaactcctatcggctcccctctcgggtgctgaacgtggtgaacaaggag
attcgccacatcaagaagcgtcaggagaaagacctccgcccccggaaggaaggtgggagc
gtcgaagcggtgtcctcgccatcgatgctcgacctcgtccggaacgttcgcaacaccatc
caggacgagaacaagtgtgcggacgaggaccgtgagggcagcgtcatgctgctgttccgg
gcgcgctaccagatgttcgacttcgtcgacgagttcatcaaggagggaatccccttctcc
tcgctcactgaccagcgcctctggaccgaccggctcaccgactacgtccgagccatcgag
gccatcgaagccgacgagcgcatgacggcgcttcaggcgcgccggctggcggatatcctg
caggattcggccttcggtggcggcgaccgcgacgacctctacgacctcatcgacgacgtg
gaggatacccacgccgaggacgacctcgcggccatccccatcgccccggacgcggtggac
gacacggtcccgttcatgccggaaccagaggcggccgcagatatggcgcggaagatcacg
tccttccagcgcaaatccatcgcggcgtacttcgacggcgactacgaggggatggacccc
gaccgcgtgcgcgtcggcaccatccactccgccaagggtcgcgaggccgaccacgtcttc
atggccaccgacctcaccgagaaggttgtcgagcagatggccgcccaagccgcccagcag
ggaatcgagacgccgggtgaggaggagttcaccaagaccaccaatccggtgcccgtcctc
accgacaacgagcggcgtgtgttctacgtcgggatgtcccgggcccgcgagcgcctggtg
ctcatggagaatctggtctctggggcgccgacgctccccatcagcgtccttctgttcaac
gaactccgtgagggtgaaccgatggaccacatcgacgaggtgcaggcggaactcgaggca
cccgaacccgagccatga
DBGET
integrated database retrieval system
