Halophilic archaeon: Halar_3694
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Entry
Halar_3694 CDS
T01603
Name
(GenBank) metal-binding domain in RNase L inhibitor, RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hah03009
]
Halar_3694
Ribosome biogenesis [BR:
hah03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Halar_3694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_16
AAA_23
AAA_22
AAA_29
AAA
NB-ARC
Fer4
RsgA_GTPase
Fer4_6
AAA_24
nSTAND3
Fer4_7
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
AEN07268
LinkDB
All DBs
Position
2868881..2870707
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AA seq
608 aa
AA seq
DB search
MSSDSIAVVDLDRCQPDRCNYECQNFCPPNRTGKECITLRGDAAEELGGIEGEPDQVKIS
EEICLGESCGICVEKCPFDAIEIINLPSELEEEPVHRYGENAFALYGLPTPEPGNVTGLL
GPNGIGKSTAVHALAGEVTPNLGNFDDEPDWDAVLDRYRGTQLQNYLEKLLADEVSVARK
PQYIDQIPDQFDGEVRELLSATDERGDLDYLVEELSIKPVMEQSIDSVSGGELQRVALAA
TLARDVDFYFLDEITPYLDISQRMTAARLIRELADEDRSMLVVEHDLAILDLLADTLHVT
YGEPGAYGVVTDPKSVRNGINEYLTGYLNNENMRIRPESITFEQHAPRSSTKGQPLVEYP
DMSKSYGEGEFSLDVEGGTIYESEVLGVVGPNGIGKSTLAKMFTGALTPDDGELDTELEI
AYKPQYIEIDQPMRVDAFLASITDEFGSSYWNTEIAQPLQLSRIMEQNLDDLSGGERQRV
AIAACLSKDADLYLLDEPSAHLDVEQRVQATSAIRRYTENHDATAMVIDHDIYMIDLLSD
RLMVFDGEPAQHGTARPPTEMRAGMNDFLGDLDITFRRDERTGRPRINKPDSQKDREQKR
NGEYYYTD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgacagtatcgcggtcgtcgacctcgaccggtgtcagccggaccgctgtaac
tacgagtgtcagaacttctgcccgcccaaccggaccgggaaggagtgcatcaccctccgg
ggtgacgccgccgaggagctcggcggaatcgaaggcgaacccgaccaggtgaagatctcc
gaggagatctgtctgggcgaaagctgtggcatctgtgtcgagaagtgcccgttcgacgcg
attgagattatcaacctcccctcggaactcgaggaggagcccgtccaccgatacggggag
aacgccttcgcactgtacggtctccccacccccgaaccgggcaacgtcacggggctgctc
ggcccgaacggcatcgggaaatccaccgccgtccacgcgctggccggcgaggtgacgcca
aacctcgggaacttcgacgatgaacccgactgggacgccgtcctcgaccgctaccgcggc
acccaactccagaactacctcgagaagctgctggccgacgaggtgtcggtcgcacgcaaa
ccccagtatatcgaccagattcccgaccagttcgacggggaggtcagggaactactctca
gcgacggacgaacggggcgacctcgactacctcgtcgaagagctctccatcaagccggtg
atggagcagtccatcgactcggtgtcgggtggagagctccagcgggtcgccctcgcggca
acgctggcacgggacgtggacttctacttcctcgacgagatcaccccctatctcgacatc
agccagcggatgaccgccgcacggctcatccgggaactggccgacgaggaccgctcgatg
ctcgtggtcgaacacgacctcgctatcctcgacctgctggctgacacgctccacgtcacc
tatggggagccaggggcctacggtgtcgtcacggacccgaaatcggtccgaaacggcatc
aacgagtatctgacgggctacctcaacaacgaaaacatgcggattcggcccgagtccatc
accttcgagcagcacgcgccgcgctcctcgacgaagggccagccgctggtcgagtacccc
gacatgtccaaatcttacggcgaaggagagttctccctcgacgtggagggcggcaccatc
tacgagtcggaagtgctgggcgtggtcggcccgaacggcatcgggaaatcgacgctcgcg
aagatgttcacgggcgcgctcactcccgacgacggtgaactcgacaccgaactggagatc
gcctacaagccccagtatatcgaaatcgaccagccgatgcgggtcgacgcgttcctggcc
tcaatcaccgacgagttcggctcttcctactggaacaccgaaatcgctcagccgctgcag
ctcagccgcatcatggaacagaacctcgacgacctctcgggcggggagcgccagcgggtc
gccatcgcagcctgcctctcgaaggacgccgacctctacctgctggacgagccgtcggcg
cacctcgacgtcgaacagcgggtgcaggccacctcggccatccgccgctacaccgagaac
cacgatgcgacggcgatggtcatcgaccacgacatctacatgatcgacctgttgtcggat
cgcctgatggtgttcgacggcgagcccgcccagcacgggaccgcccgtccgcccacggag
atgcgtgcggggatgaacgatttcctcggggacctcgacatcaccttccggcgggacgag
cggaccggccgcccgcgcatcaacaaacccgacagccagaaggaccgcgagcagaagcgc
aacggcgagtactactacacggactga
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