Hahella sp. KA22: ENC22_02385
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Entry
ENC22_02385 CDS
T05793
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ENC22_02385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahe03400
]
ENC22_02385
Enzymes [BR:
hahe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ENC22_02385
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ENC22_02385
DNA repair and recombination proteins [BR:
hahe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ENC22_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
AZZ90088
UniProt:
A0AAE5XG42
LinkDB
All DBs
Position
complement(541279..542094)
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AA seq
271 aa
AA seq
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MPELPEVETTRRGVAPHITGRKILKVNVYEPRLRWPVPADLPAAARGKTVQDVTRRAKYL
LINLGENELLFHLGMSGNLRIVAPETPRMKHDHVDILLEGDITLRYNDPRRFGCLLLLNP
PTQEHPLLRHLGPEPLSDQFSGELLYKLSRQRKSPIKTFLMDQAIVVGVGNIYANEALFL
AGIRPTRPAGEVSLKRYQALAEAVRKVLSDAINMGGTTLRDFVGGDGKPGYFQQTLRAYG
RGGQPCTVCKTELKEIKLGQRASVFCPSCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaattaccagaggtggaaaccacccgcagaggcgtcgcgccccacatcaccggc
cgtaaaattcttaaagtaaatgtctatgaaccacggctacgctggccggtgccagccgac
ttgcctgccgccgccagaggcaaaacagtgcaggacgtcacacggcgcgccaaatatctg
ttaatcaatctgggtgaaaatgagctgctctttcatttgggaatgtccggcaatctgcgc
atcgtggccccggaaactccacgaatgaagcatgatcatgtagatatattgctcgaaggc
gatataactttgcgttacaacgatccgcgacgtttcggctgcctgttgctgctaaatccg
ccaacgcaggaacatcccctgctgagacatctcggtcctgagcccttaagcgatcagttc
agtggagagcttctttataagttgtcccggcaacgcaagtcaccgattaaaacattcttg
atggaccaggctatcgtggtcggcgttggcaatatttacgcgaatgaggctctgttcctg
gcgggcatcagacctacacggccagcgggagaggttagtctcaaacgttatcaggctctg
gcggaagcggtaagaaaagtactaagcgacgccatcaacatgggcggcaccactttgcgt
gattttgtagggggggacggcaagccaggttactttcagcaaacgctgcgggcctatggt
cgtggcggacaaccctgtacggtgtgtaaaacggaactcaaagaaatcaaattaggccag
cgggccagcgtgttctgtccctcctgccaacggtaa
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