Hahella sp. KA22: ENC22_06180
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Entry
ENC22_06180 CDS
T05793
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ENC22_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahe03019
]
ENC22_06180
03009 Ribosome biogenesis [BR:
hahe03009
]
ENC22_06180
Messenger RNA biogenesis [BR:
hahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ENC22_06180
Ribosome biogenesis [BR:
hahe03009
]
Eukaryotic type
Pre-60S particles
RNases
ENC22_06180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ead_Ea22
Motif
Other DBs
NCBI-ProteinID:
AZZ90797
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All DBs
Position
1384695..1385243
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AA seq
182 aa
AA seq
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MSRRDNLIWIDLEMTGLDPDSDRIIEMAVVVTTSNLELVAEGPVIAVHQPDSVLALMDDW
NRNTHGTSGLTDRVKASTIGEAEAEKQMLDFLAQHVDAGCSPMCGNSIGQDRRFLARYMK
DLEKFFHYRNLDVSTLKELARRWRPEVAAGIKKKGSHQALEDIRESVEELRYYREHFLRL
TD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcgcgataacctgatttggatcgacttggagatgaccggactggatccggac
tcggaccgaattattgaaatggcggtggtcgtcaccaccagcaacctggaattggtcgcc
gaagggccggttatcgcagtgcatcagccagacagcgtattggcgctcatggatgactgg
aatcgcaatacacatgggaccagcggactgacggaccgggtcaaggccagcacaatcgga
gaagctgaggcggaaaaacagatgctggattttctggcgcagcatgtggatgcgggctgc
tcccctatgtgcggcaattccattggccaggatcgccgctttctcgcccgctacatgaag
gatctggaaaagttcttccattaccgtaacctggatgtcagtacgctgaaggagctggcc
cgtcgctggcggccggaagtggccgctggaatcaagaaaaaaggctctcatcaggcgttg
gaggacatcagagaatcagtcgaagagctgcgttactaccgcgaacacttcctgcgttta
acggactga
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