Hahella sp. KA22: ENC22_06405
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Entry
ENC22_06405 CDS
T05793
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hahe
Hahella sp. KA22
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hahe03009
]
ENC22_06405 (rimO)
Enzymes [BR:
hahe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ENC22_06405 (rimO)
Ribosome biogenesis [BR:
hahe03009
]
Prokaryotic type
ribosomal protein modification factors
ENC22_06405 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZZ90838
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Position
1432813..1434132
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AA seq
439 aa
AA seq
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MSSSSGKVGFVSLGCPKNTVDSERILTQLRTEGYEISASYEDADVVLVNTCGFIDSAVQE
SLDAIGEALRENGKVIVTGCLGAKEDVIREVHPKVLAVSGPHAYSEVMNQVHQVAPKPEY
NPFLNLVPDTGVKLTPKHYAYLKISEGCNHRCTFCIIPSFRGDLESRPIGDVLGEAQRLV
NNGVKELLVISQDTSAYGVDTKYRTGFWEGRPVKTRMKELCDELGRMGVWVRLHYVYPYP
HVDDVIPLMADGKILPYLDIPFQHASPSVLKNMRRPAHAEKVLHRIGRWREQCPDITLRS
TFIVGFPGETEDDFQTLLDFLEEAQLDRVGCFKYSPVEGATANELPDPVEEAVKQERWER
FMEVQQRISAGRLQAKIGKRMDVIVDEVVEEGAVCRSKADAPEIDGQVFLDNQTHLKPGD
MVTVEIEDADEYDLWGRPV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttctagcggcaaagtgggtttcgtcagccttggctgccccaaaaacacagta
gactcggagcgcattctgacgcaactgcgtacggaggggtacgagatatcggccagctat
gaagatgcggatgtcgttttggtgaacacctgcggctttatcgatagtgctgtgcaagag
tctctggacgctattggcgaggcgttgcgcgagaacggcaaagtcatcgtgaccgggtgt
cttggcgccaaagaggatgtgatccgtgaagtgcacccgaaagtgctggcggtaagtggc
ccgcacgcttattcggaagtgatgaaccaagtgcatcaagtggctccgaagcctgaatac
aaccccttcctcaaccttgtgcccgatactggggttaagctcacgcccaagcattatgcc
tatctgaagatatctgaaggctgtaaccaccgttgtacgttttgcataattccgtccttc
cgcggtgacttggagagccgtcctatcggtgatgtgttgggcgaggcgcaacgcctggtg
aataacggcgttaaagagttgctggtgatctctcaggacaccagcgcttatggcgtggat
actaagtatcgcactggcttttgggaaggtcgccccgtaaaaacgcgaatgaaagagctt
tgtgacgagcttgggcgcatgggggtttgggtgcgactgcactatgtgtatccttatccc
catgttgatgacgtcattccgttaatggcggacggtaaaattcttccttatctggatatt
ccatttcagcacgcctctccgtctgtgctgaaaaatatgcgtcgtccagcccatgcagag
aaggtgctgcacagaattggcaggtggcgtgagcagtgtccggatattactctgcgctcc
acctttatagtcggctttcctggggaaactgaagacgatttccagacgttgctcgacttc
cttgaagaagcgcagttggatcgagttggatgttttaaatattctccggtggaaggcgcg
acggcgaatgagttgcctgatcctgttgaagaagctgtcaaacaggagcgctgggagcgc
tttatggaagtgcagcagcgtatcagcgccggtcgtctgcaggcgaaaatcggcaagcgt
atggatgtgattgtggacgaggtggtggaagaaggggcggtttgtcgttccaaagcggat
gcgccggaaatcgacggacaagtgtttttggacaaccagactcatctgaagccgggcgac
atggttacggtggagatagaggatgcggacgaatatgacttgtgggggcgtccagtataa
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