Hahella sp. KA22: ENC22_09090
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Entry
ENC22_09090 CDS
T05793
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hahe
Hahella sp. KA22
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahe03032
]
ENC22_09090 (topA)
03400 DNA repair and recombination proteins [BR:
hahe03400
]
ENC22_09090 (topA)
Enzymes [BR:
hahe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ENC22_09090 (topA)
DNA replication proteins [BR:
hahe03032
]
Prokaryotic type
DNA Topoisomerases
ENC22_09090 (topA)
DNA repair and recombination proteins [BR:
hahe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ENC22_09090 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
YdjO
Zn_ribbon_recom
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AZZ91349
LinkDB
All DBs
Position
2018175..2020790
Genome browser
AA seq
871 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSEYVVKSSVGHIRDLPTSGGKETSSPKERAAEAAKMRK
LPAEERESIKKRKARDQLISRMGVDPENDWAARYEVLPGKEKVVEELRRLAKSADQIYLA
TDLDREGEAIAWHLKESIGGDDSRYRRVVFNEITKSAITEAFKSPGQLDYNRVNAQQARR
FLDRVVGYMVSPLLWSKIARGLSAGRVQSVAVRLIVEREREIRAFTPEEYWELHALLSKS
KQQAKFQVAKYKGENYRPTNKEQSDKLTALLESQAFKVVNREDKPSVTKAPAPFITSTLQ
QAASTRLGFSVKKTMVLAQRLYEAGYITYMRTDSTNLSADAVSACREFIGKKFGDKYLPE
SPKTYVSKERAQEAHEAIRPSDINVGSNHISGLEKDAEKLYDLIWRQFVACQMENARFLS
TSIQVQAGDFELRTRGRLLQFDGFLKVLPAQAKKDDEAELPAFEINDQLDLDKLEPTQHF
TKPAPRYTEATLVKELEKRSIGRPSTYASIISTIQERGYVKLANRRFYAEKMGDIVTDRL
TEAFTDLMDYGFTAKMEGQLDEIASGNEGWKQVLNAFYSDFAKKLEKADMEGGMRANQAV
QTEITCPTCSRPMQIRTASTGVFLGCSGYALPPKERCKTTINLIPGDEVIRADDEEGEAN
ALRAKKRCPICDTAMDSYVIDETRKLHVCGNNPDCEGYEIEGGQFKVAGYDGPTLECDKC
GAEMQLKTGRFGKYFGCTSSTCGNTRKLLKNGEPAPPKMEPVVMPELACDKVDDIFVLRD
GASGLFLAASKFPKNRETRAPLVEELIPHKKEIDPKHHYLLDAPARDPEGNPAIIRFSRK
TKQQYVMSEKDGKPTGWSAFYKDGKWAAKDK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtaatcgtggagtcccctgcaaaggcaaaaaccataaacaaatat
cttggttcggaatatgtagtcaaatccagtgtggggcatattcgtgatttgccgaccagt
ggaggtaaggaaacatcatctccgaaagagcgtgcggcggaagcggcgaaaatgcgcaag
ctgcctgctgaagagcgcgaaagcatcaagaaacgtaaagcccgggatcagctgatctct
cgtatgggcgttgaccctgaaaatgattgggcggcccgctacgaggtccttccaggtaaa
gaaaaagtcgttgaagaattgaggcgtctggcgaaaagcgccgaccagatctatctcgca
acggacttggaccgtgaaggagaggctatcgcctggcatctaaaagaatctattggcggc
gatgactcccgttatcgtcgcgtggtctttaacgagatcacaaaatccgccataactgag
gcgtttaaaagtcccggtcagcttgattacaatcgcgtaaacgcccagcaggcgcgccgc
tttctcgaccgcgtggtcggttatatggtgtcgccgctgctgtggtccaagattgcgcgt
ggtttgtccgctgggcgggtgcaatccgtcgcggtgcgtctgattgttgagcgcgagcgt
gaaatccgcgcctttacgccggaagaatactgggaattgcatgcgctactgtccaagagt
aagcagcaggctaaattccaggtcgccaaatataagggtgagaactacagacctaccaac
aaggagcagtctgacaagctgactgcgttgctggagtcgcaggcgttcaaggtcgtcaat
cgcgaggataagccctccgtcaccaaagcgccggcgccatttatcacctctaccttgcag
caggcggcgagcacccgtttagggtttagcgttaagaagaccatggtgttggcgcagcgt
ctctatgaggcgggctacatcacttatatgagaacggactccaccaacctgtctgctgat
gcggtgagcgcctgtcgtgaatttatcggcaagaagtttggcgataaatatctgcctgaa
agcccgaagacatacgtgagtaaagagcgggcccaggaagcgcacgaggcgatacgtcct
tccgatatcaatgtaggctccaatcatatttccggtctcgaaaaagacgccgaaaagctg
tatgaccttatttggcgtcaatttgtagcctgtcagatggaaaacgcgcgcttcctgagc
accagtattcaggtgcaggcgggagactttgagctcagaacccgtggccgacttctgcag
ttcgacggcttccttaaggtgctgcctgcgcaagcgaagaaggatgacgaagcggagttg
ccggcgttcgaaatcaacgatcagttggatctggataaactggagccgacgcagcacttc
actaagccggcgccgcgctatacggaagcaacgctggttaaagagctggaaaagcggagt
atcgggcgtccttctacttatgcgtcaatcatctccaccattcaggagcgcggctatgtg
aagctggccaaccggcgtttctatgcggagaagatgggcgatatcgtgacggaccgtttg
acggaagcctttacagatctgatggattacggctttacggcgaagatggaaggtcagctg
gatgagatcgcgtctggcaacgagggctggaagcaggttctcaacgctttctactctgat
ttcgccaagaagctggaaaaggcggacatggaaggcggtatgcgcgctaatcaggcggtg
cagacggaaattacatgtccgacctgttcgcgcccgatgcagatacgtacagcttccact
ggcgtgttccttggatgttccggttatgcgctgccgccaaaagagcgttgtaagacgacg
atcaacctgattcctggcgatgaggtgattcgtgcggacgatgaagagggcgaggcgaat
gcgctgcgcgcgaaaaagcgctgtccgatttgcgataccgccatggatagttacgtcatt
gatgaaacccgcaagctgcacgtgtgcgggaataacccggactgtgaaggttatgagatt
gaaggcgggcagtttaaggtggctggctacgatgggccgacactggagtgcgacaagtgt
ggcgctgagatgcagcttaaaaccggccgctttgggaagtacttcggttgcaccagttca
acctgtggcaatacccgcaagctgttgaagaatggcgagcctgcgccgcccaagatggag
cctgtagtcatgcccgagttggcgtgcgacaaggttgacgatatctttgtgttgcgcgat
ggcgcttcaggcttgttcctggcagcgagtaagtttcccaaaaaccgtgaaacccgcgca
ccactggtggaggaactgattcctcacaagaaggaaattgatcctaagcaccactacctg
ctggatgcgcctgcgcgtgatccagaaggaaatccggcgattatccgcttcagtcgcaag
accaagcagcagtatgttatgtcggagaaggatggtaagcccactggctggtcggctttc
tacaaagatggaaagtgggcggctaaagacaaatag
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