Hahella sp. KA22: ENC22_09315
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Entry
ENC22_09315 CDS
T05793
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ENC22_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahe03019
]
ENC22_09315
Enzymes [BR:
hahe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ENC22_09315
Messenger RNA biogenesis [BR:
hahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ENC22_09315
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
RecX_HTH2
HEM4
Motif
Other DBs
NCBI-ProteinID:
AZZ91392
UniProt:
A0AAE5XHW2
LinkDB
All DBs
Position
complement(2071863..2073227)
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AA seq
454 aa
AA seq
DB search
MSFASLGLSAPILDAISEQGYTSPSPIQLKAIPVVLEGKDVMAAAQTGTGKTAAFTLPIL
ERLSKGERARSNQARALILTPTRELAAQVGDCVSLYSSKLPLRSTVVFGGVKINPQMMRL
RRGVDVLVATPGRLLDLYNQNAVRFQDLEVLVLDEADRMLDMGFIHDIRKILDILPKRRQ
NLMFSATFSNDIRKLAKDLVNNPVEISVSPPNTTAKTVKQWIHPVDKKQKSALLAQLIRD
NNWDQALVFSRTKHGANRLTRQLSAKGINAAAIHGDKSQNARTKALADFKAGSVQILVAT
DIAARGIDIDQLPQVVNFDLPQVAEDYVHRIGRTGRAGAEGQAVSLVSADEFKLLADIER
LIQKRLPREEIEGFEPEQRLPESRLPTQPVKARKPKKPKAAKNGDQRGQDRKGEKKGPRQ
DGAARNSANAPRRQRRRGAGGAGKPAQRKEAKGN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgcctccctcggcttgtccgcccccattctcgacgctatttctgaacaaggc
tacacatcgccctcccccatccagctgaaggcgatacctgtcgtactagaaggcaaagac
gtcatggcggccgcgcagacgggaaccggcaaaaccgccgccttcacgctgcccattttg
gaacgcttgtctaaaggcgagcgggctcgctccaaccaggctcgcgccttgatcctcacg
ccgacgcgggagcttgcagctcaagtcggcgactgtgtgtccctttacagcagcaaactg
cctctgcgctccaccgtggtttttggcggggtaaaaattaatccgcagatgatgcgcttg
cgtcgcggtgtagacgtgctggtggcgacgcctggacgcctgctcgacctgtacaatcaa
aacgccgtgcgctttcaggatctggaagtgctggtgctggatgaggccgaccgcatgctg
gacatgggctttatccacgatattcgcaagattctggatattttgccgaaacgtcggcaa
aacctgatgttctccgccaccttctctaacgatattcgcaagttagcgaaggatctggtt
aacaatccggtggagatttccgtgagtccgcccaacaccacagccaaaacagtcaagcag
tggattcacccggttgataaaaagcaaaaatccgcgctattggcgcagctcatccgcgac
aataactgggaccaggctctggtgttcagccgcaccaaacatggcgcaaatcgcctgacg
cggcaactcagcgccaaaggcatcaatgccgccgccatccacggcgacaaaagccagaac
gccagaaccaaggcgctggcggatttcaaagcaggcagcgtacagattctggtggcgacg
gacatcgctgcgcgcggcatcgacatcgatcagctgccgcaggtcgtgaactttgatcta
ccccaagtggcggaagattatgtacaccgcatcggacgcaccggccgcgccggcgcggaa
gggcaagcagtatcgctggtcagtgcggacgagtttaaattactcgccgatatcgaaagg
ctgattcaaaagcgtctgccccgtgaggaaatcgaaggatttgagcctgaacagcgactg
cctgaatcgcgtctgccgactcaacccgtgaaggcgcgcaagccgaagaaacctaaagca
gccaagaatggggatcagcgcggtcaagatagaaagggcgagaaaaaaggccctcgacaa
gacggcgcagcgagaaacagtgcgaacgcacctcgcagacaacgcagaagaggcgctggt
ggcgctggaaaacctgcgcaacgcaaagaggccaagggcaactaa
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