Hahella sp. KA22: ENC22_10410
Help
Entry
ENC22_10410 CDS
T05793
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ENC22_10410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahe03019
]
ENC22_10410
Enzymes [BR:
hahe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ENC22_10410
Messenger RNA biogenesis [BR:
hahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ENC22_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AZZ91588
UniProt:
A0AAE5XIK8
LinkDB
All DBs
Position
2321995..2323176
Genome browser
AA seq
393 aa
AA seq
DB search
MTVSDQTTDNAVLFSSLNLHPKLEQAIRDLNFERCTPIQGQTLPHTLQGVDLIGQAQTGT
GKTAAFLITILQRLVSNPIPTEERFSSEPRALVVAPTRELALQIEKDACALAKHLKLNII
SVIGGTQLDRQRRKLRDEAVDLLIATPGRLLDHLTSADIYLDQVEVLVLDEADRMLDMGF
IPDVKRIVRATPRERQTLLFSATFSEDIKNLARRWTEEPVEVMLAVDHLPAKTVDQRVYM
VESSAKRKLLVNLLKDSETRRVIVFCNRRDETRSLSEALNRHSIKNELISGELPQQKRVK
TLERFRKGDFRVLVATDVAGRGLHIDGVTHVVNYNLPDDPEDYVHRIGRTGRAGATGVSI
SFACEDDSFLIPELEKYLGHELALIHPDDDLLQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacagttagtgatcaaacgacggataacgccgtcctcttttcttctctgaatttacat
ccaaaacttgagcaggctattcgcgatctgaattttgagcgctgcactccgattcagggg
cagacgctgccgcacacgctgcagggagtggacctgatcggtcaggcgcagacaggcacc
ggcaagaccgccgcgttcctgatcaccattctacagcgactggtttccaacccgatccca
acggaagagcgtttctccagtgagccgagagcattggtggtggcgccgacacgggaactg
gcgctacagatcgagaaagacgcctgtgcgctcgcgaaacacctgaaactgaacatcatt
tccgtcattggcggcacgcagttggatcgccagcgcagaaagctgcgggacgaagccgtg
gatctgctgatcgccacgccgggccgtctgcttgatcatctcaccagcgccgacatttat
ctggatcaggtggaggtgctggtgctggacgaagcggatcgcatgctggacatgggtttc
attcccgacgtcaaacgcattgtccgggcgacgccgagagagcggcagactctgctgttc
agcgcgaccttcagcgaagacatcaaaaatctggcgcggcgctggactgaagaaccggtg
gaagtcatgctggcggtggatcaccttcccgccaaaaccgtggatcagcgcgtttacatg
gtggaaagcagcgccaagcgcaagctgttggtgaacctgctgaaggacagtgaaacccgt
cgcgtgatcgtattttgtaaccgccgcgacgaaacccgcagtctgtcggaagccttgaat
cgccattccatcaaaaatgagctgatatccggcgagctaccccagcagaaacgtgtgaag
acgctggaacgctttcgtaaaggcgacttccgtgtgttggtcgccactgatgtcgcgggc
cgtggtctgcatatcgatggcgtgactcacgtagtcaattacaatcttcccgacgacccg
gaagattacgttcaccgtatcggacgcaccgggcgcgcaggcgcgacgggcgtctccatc
agcttcgcctgtgaggatgattccttcctgattccggaactggagaaatacctgggtcat
gagctggctctgattcacccggatgatgatttactgcagtag
DBGET
integrated database retrieval system
