Hahella sp. KA22: ENC22_21480
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Entry
ENC22_21480 CDS
T05793
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03030
DNA replication
hahe03430
Mismatch repair
hahe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ENC22_21480
03430 Mismatch repair
ENC22_21480
03440 Homologous recombination
ENC22_21480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahe03032
]
ENC22_21480
03400 DNA repair and recombination proteins [BR:
hahe03400
]
ENC22_21480
Enzymes [BR:
hahe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ENC22_21480
DNA replication proteins [BR:
hahe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ENC22_21480
DNA repair and recombination proteins [BR:
hahe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ENC22_21480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
T2SSK
HROB
Motif
Other DBs
NCBI-ProteinID:
AZZ95547
LinkDB
All DBs
Position
complement(4883181..4886657)
Genome browser
AA seq
1158 aa
AA seq
DB search
MGDFIHLRIHTEFSLVDGLVKVKPLVKKLADMGMPAVAVTDQSNMCCLVKYYKAAAGAGV
KPVVGADVWVENLDDPLAPFRLTLFARNETGYRNLTELISRGFTEGQSHGRAILKKDWIA
AQAEGMLAMSGAKYGEVGQALLAGKPELARERLAFWMEMFPDAFYLELQRTGRINDEECV
HASVELAMETGCPVVATNDVHFLERDDFEAHEARVCIHESRTLDDPRRERRFSEEQYLKS
AEEMCELFSDIPEAIDNTVEIAKRCNVSLRLGKYFLPNYPIPEGMTIDEFFIKVSEEGLE
ERLATLFKQDDPQYESKRQSYYDRLKFELDIITQMGFPGYFLIVMDFIKWAKNNGVPVGP
GRGSGAGSLVAYALKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIAYVAE
AYGRNAVSQIITFGTMAAKAVVRDVARVQGRPYSMGDRLSKLIPFEVGMTLAKAYEQEEP
LREYLNTDEEAAEIWEMARKLEGVTRNVGKHAGGVVIAPTKLTDFAPLYCDETGSGLVTQ
FDKDDVEQAGLVKFDFLGLRTLTIVDWAVDIINRQHAEKGQPPLDINFIPLDDAPTFSLL
KHGETTAVFQLESRGMKELIRRLMPDCFEDIIALVALFRPGPLQSGMVDDFINRKHGRAE
LAYPHPDYQLESLKPVLQPTYGIILYQEQVMQIAQVMAGYTLGGADLLRRAMGKKKPEEM
AKQKAIFVEGSINQGLEQDLAEKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKCHYPA
PFMAAVLTADMQNTDKVVTLVEECRRMKLDLVLPDVNNSSYTFTVDDKNRIVYGLGAVKG
LGEGPVQSILDAREEGGPFRDLFDFCQRVDLRRVNKRALEALVRSGAMDKLGPNRARMMA
SINEAVRRADQHSRNEDAGMLDLFGEVVPETDPNPYSATEGMQEWSDKERLKLEKETLGL
YLTGHPFDEYEQEVRRFVRTPISELRPGKSPQNVAGLVVAVRTMKSKRGGYIGFATLDDR
SGRIEVTFFSDAYEQAKEMLHNDRILVVEGVVGEDDYSGGLSVRAKLTSDIGQARLKFAK
ELILFVHEKDFNNGFIDELGGVLGEHRAEGCPVLINYETETARTRLRLAEDWRVNPSDEL
IQGLRYLLGKERVQLRYS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattttattcatttacgcattcacacagaattttctctggttgatggactggta
aaggtcaaacctttagttaaaaagctggccgatatgggaatgccagcggtggcggtgacc
gatcagtccaacatgtgctgtctggtcaagtactacaaagcggcggcgggcgcaggcgtg
aagccggttgtcggcgctgatgtctgggttgaaaacctggacgatcctctggctccattt
cgactcacgttattcgcccgtaatgaaaccggctaccgcaatctgacggaactcatatcc
cgcggctttactgaaggtcagtcccacggtcgcgccattctgaagaaagactggattgcc
gcccaggcggaaggcatgttggcgatgtccggcgccaagtatggcgaagtcggccaggcg
ttgctggccggtaagccggagctggcgcgcgagcggctggccttttggatggagatgttt
ccggatgcattttatctggagttgcaacgcacgggtcggattaatgacgaagaatgcgta
cacgcctctgtcgaattggcgatggaaacaggctgtcctgttgtcgccaccaacgatgtg
catttccttgagcgtgacgactttgaagcccatgaggcgcgggtctgtatccatgaaagc
cgcactttggacgacccgcgtcgggagcgccggttcagtgaagagcaatacctgaagtcg
gcggaggaaatgtgcgagctgttctcggatattcctgaggcgattgataatacggtggaa
atcgccaagcgttgtaacgtcagcttgcgcctgggtaagtacttcctgccgaattatccc
attcctgaaggcatgaccattgatgagtttttcatcaaggtctcggaagagggactcgag
gagcggttggctacgcttttcaaacaagacgaccctcagtacgagagtaaacgtcaaagc
tactatgaccggctcaagttcgagctggatatcattactcagatggggttccccggctac
ttcctcattgttatggacttcatcaagtgggccaagaacaacggcgtgccggtagggccg
ggccgggggtctggcgcgggttctctggtggcgtatgcgctaaaaatcaccgatttggac
cctctcgcctacgatttgcttttcgagcgattccttaacccggaacgggtatcaatgcct
gactttgacgtcgacttctgtatggaaggacgcgaccgggttatcgcgtacgtggcggaa
gcatacggtcgtaatgcggtgtcccagatcattactttcggaaccatggcggcgaaggcg
gtagtgcgggacgtggcgcgggtgcagggacggccttactccatgggcgatcgtctatcc
aaattgatcccctttgaagtaggtatgactctggccaaggcctatgagcaggaagagccg
ctgcgggaatatctgaacacggatgaagaagcggcggaaatctgggagatggcgcgcaag
ttggaaggggttacccgtaacgtcggtaagcacgccggtggggtggtgatcgctcccacc
aagttgactgactttgcgcccctgtactgtgacgaaacgggttcgggtctggtcactcag
ttcgataaggacgacgtagagcaggcaggtctggttaagttcgactttctgggtttgcgt
acgctgaccatcgttgattgggcggtggacatcattaaccggcaacatgccgaaaaaggc
cagccgccgctggatatcaactttatcccgctggacgacgcgcctaccttcagtctgctc
aagcatggcgaaaccaccgcggtgttccagcttgaatctcgcggtatgaaagaacttatc
cggcgtctgatgccggactgttttgaagacatcatcgctcttgtggccctgttccgtccg
gggccgctgcaatcgggcatggttgacgactttatcaatcgtaagcacggacgcgcagaa
cttgcctatccgcatccggattatcagctggaatccttgaaacctgtcctgcagcccacc
tacggcatcatcctgtatcaggagcaggtaatgcagatcgcccaggtgatggcggggtac
acgcttgggggcgcggacttactgcgtcgagccatgggtaaaaagaaacccgaagaaatg
gccaagcagaaggcgatcttcgttgaagggagcatcaatcaaggccttgagcaggatctg
gcggaaaagatcttcgacctggtggaaaagtttgcgggctacggtttcaacaaatcccac
tccgccgcttacgccttggtgtcttatcagactgcgtggctgaagtgccactatcctgcg
ccgtttatggctgcggtgcttaccgcggatatgcagaacaccgataaagtggtgacgctg
gtggaagagtgccggcgcatgaagctggacttggtgttgccagacgtcaataacagtagt
tataccttcacggttgacgataaaaatcgcatcgtttatggcctgggcgctgtcaagggg
ctgggtgaaggccctgtgcaaagtattttggacgcccgcgaagaaggcggtcctttccgc
gacctgtttgatttctgtcagcgggtggatttacgtcgggtcaacaaacgcgctttggaa
gcgctggtccgctctggcgcgatggacaagctgggaccgaaccgcgcccgtatgatggcg
tccatcaatgaagcggtgcgtcgcgcggatcaacattctcgcaatgaagacgctggaatg
ctggacttgtttggtgaggtggtgccggaaacggacccaaatccctacagcgcgacggaa
ggcatgcaggaatggagcgataaggagcgcctcaaattagagaaggagactctgggcctg
tatctgactggtcacccgtttgatgaatatgaacaggaagtgcgccgatttgtgcgaacg
cccatttctgagttgcgtcccggcaagagtccgcaaaatgtagcgggcctggtagtggcg
gtgcgcacgatgaagagcaagcgcggcggatatattggttttgccacgttggatgatcgt
agcggccgcattgaagtgacttttttctccgacgcctacgagcaagccaaagaaatgctg
cacaacgaccgcattctggtggtggagggcgttgttggcgaagatgactactctggtggg
ctttctgtccgggcgaaattgacttcggacatcggtcaagcgcgattgaagttcgccaaa
gagcttattctctttgtacacgaaaaagattttaataacggctttattgacgaactgggc
ggcgttttgggagagcatcgcgccgagggctgcccggttttgatcaattatgaaacggaa
accgcccgcaccagactgcgtctggcggaagattggcgggttaatccaagcgatgaattg
attcaggggctgcgatatttgttgggcaaggagcgggtgcaactgcgttacagttga
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