Hahella sp. KA22: ENC22_24560
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Entry
ENC22_24560 CDS
T05793
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hahe
Hahella sp. KA22
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hahe03016
]
ENC22_24560 (truB)
Enzymes [BR:
hahe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ENC22_24560 (truB)
Transfer RNA biogenesis [BR:
hahe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ENC22_24560 (truB)
Prokaryotic type
ENC22_24560 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AZZ94198
LinkDB
All DBs
Position
complement(5566565..5567500)
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AA seq
311 aa
AA seq
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MARRKKGVPLDGVLVVDKPQDWTSNAVLQKVKYALNAQKAGHTGALDPLATGVLPLCFGE
ATKFSQLLLDSDKEYVTCAYLGRTTTTSDAEGEIISDSPVPDLSISELENILEQFRGSLK
QIPSMYSALKHKGTPLYKLARQGIEVEREARDIVIHELELLEYTQPYLRLRVLCSKGTYI
RNLVEDIGEVIGCGAHVTELRRTRCGPFTLEDGVSFAPFEDESGRQVAAEEYQQRLLSVD
SSVRQFPEILLDEANTGSIIQGQTVKISPLSSEGRVRLYSYGRRFIGLGEVMSDGTLKPV
RLLNVSALSAE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaggcgtaagaaaggcgtgcctttagatggcgtattagttgttgataaaccgcaa
gattggacttccaatgcagttttgcaaaaggttaagtatgcgctgaatgcccagaaggca
ggccataccggcgccttggatccccttgcgaccggggtgcttcccttgtgcttcggtgag
gcgaccaagtttagccagctgctgctggactcagataaagagtacgtgacctgtgcttac
cttgggcgcactaccaccacgtctgacgccgagggtgagatcattagtgattcgcctgtt
cctgatctgtctatttccgaactggaaaatatcctcgagcaatttcgagggagtctaaag
cagattccctcgatgtattccgcgcttaaacacaaaggaaccccactttataagcttgcc
agacaaggtattgaggtcgagcgggaagcgagggatattgtgatccatgagcttgagctt
ctggaatatactcaaccatatttacgcttgcgggttctctgcagtaaagggacctatatt
cgaaaccttgtggaagatattggtgaagttataggatgtggcgcgcatgtgacggaattg
cgtcgtactcgttgcggaccatttacgctggaggatggcgtcagctttgcgccatttgag
gacgaaagcgggcgtcaggttgccgcagaggaatatcagcaacgtttgctgtctgttgat
tcatcggtccggcaattccctgaaatattgctggatgaagctaatacaggctcgattatc
caggggcaaacggttaaaatatcgcctctctcaagtgagggtagggtgcgtttgtattca
tacggacgtaggtttatcggtttgggagaagtgatgagtgacggaacgttaaaacccgtt
cggttactgaatgtgagcgcattaagcgctgaataa
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