Hahella sp. KA22: ENC22_27085
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Entry
ENC22_27085 CDS
T05793
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ENC22_27085 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahe03019
]
ENC22_27085 (pcnB)
Enzymes [BR:
hahe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ENC22_27085 (pcnB)
Messenger RNA biogenesis [BR:
hahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ENC22_27085 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AZZ94656
UniProt:
A0AAE5XMJ2
LinkDB
All DBs
Position
6119783..6121156
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AA seq
457 aa
AA seq
DB search
MLKKLMGLIKPGRKEAGAKPLKLRIIPRDSHTVSRKQISPAALKVLYRLNSANYDAFLVG
GGVRDLLLGEQPKDFDVATSATPEQVREQFNNCRLIGRRFRLAHVRFGREIIEVATFRAG
HQNAGEDDGDAVTSDSGQILRDNVYGNQEEDALRRDFTVNALYYCVRDFSIYDYAGGIED
IEHQVLRLIGDPETRYREDPVRMLRAARFAAKLDFSIEERTASPILELGPLLLNIPSARL
FEEVLKLFLSGKAVRTFEILRQFDLFKFLFPETDRLLEAEHPYAEKLILQALRNTDKRIA
QDKPVTPAFLYAAMLWSPMQRLQQRYLDDGLPPMQAMHKAIDKVLAQQVKHTALPKRFSQ
PMREIWELQLRLPRKQSKRLQGLVEHPRFRAAYDFLVLREQSGEDLQGLGEWWTRYQEAD
DQGRSKLQQQGPKRDGSGGRRRPRRRPRRTNNSAPSQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagttaatgggcctgataaaaccgggacgcaaagaagccggcgcaaaacct
ttgaaactgcgaatcatcccccgcgacagccatacagtctcacgcaagcagatcagccct
gcggcgttgaaagttctctaccgcctgaacagcgccaactatgacgcctttctagtcggc
ggcggcgtccgcgatttattactgggcgaacagcccaaagacttcgacgtcgccacaagc
gcaaccccagagcaagtgcgcgagcagttcaacaactgccgtctgatcgggcgtcgtttc
cgcctcgctcatgtgcgcttcggtcgtgagatcatcgaagtcgccacgtttcgcgccggc
catcaaaatgctggcgaagacgatggcgacgcggtcaccagcgactcaggccagatattg
cgcgacaatgtctacggtaatcaggaagaagacgcgctacgccgcgacttcaccgttaac
gcgctctattactgcgtcagagatttcagtatttatgactacgctggcggaatcgaagac
attgagcaccaggttctgcggctgatcggcgatcctgaaacccgttatcgggaagacccc
gtacgcatgctgcgcgcagcccgattcgcggcaaaactggatttttccatcgaagaacgc
accgccagtcctattctggaactggggcctttgcttctcaacattccctccgcgcgtttg
tttgaagaagtactgaagctgttcttatccggcaaagccgtacgcacattcgaaattttg
cgccagttcgacttattcaagtttctgtttccagaaaccgaccgcctgttggaagctgag
cacccatacgcggaaaaactgatcctgcaggcgctgcgcaatacagataagcgaatcgcc
caggacaaaccagtaactcctgcgttcttgtacgcagccatgttgtggtcgccaatgcaa
aggctgcagcagcgttatctggacgatggcttgcctcccatgcaggcgatgcataaggct
atcgacaaagtactggcgcagcaggtcaaacacactgccttgcccaagcgttttagccag
cccatgcgcgaaatctgggaattgcagctccgtctgccccgcaaacaaagcaagcgtctg
caaggcttagtggagcatccacgcttccgcgccgcctatgacttcctggtcttacgcgaa
caaagcggtgaagacctgcagggacttggcgagtggtggacgcgctaccaggaagccgat
gaccaggggcgcagcaaattgcagcagcaaggccctaaacgggacggctccggcggacgc
agacgtccgcgcagacgcccgcgccgcactaacaacagtgcgccatcgcaatga
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