Hahella aquimaris: O5O45_01215
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Entry
O5O45_01215 CDS
T09430
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hahh
Hahella aquimaris
Pathway
hahh03030
DNA replication
hahh03430
Mismatch repair
hahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O45_01215 (holA)
03430 Mismatch repair
O5O45_01215 (holA)
03440 Homologous recombination
O5O45_01215 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahh03032
]
O5O45_01215 (holA)
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_01215 (holA)
Enzymes [BR:
hahh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O45_01215 (holA)
DNA replication proteins [BR:
hahh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O5O45_01215 (holA)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O5O45_01215 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WLQ14556
LinkDB
All DBs
Position
complement(236087..237103)
Genome browser
AA seq
338 aa
AA seq
DB search
MRIKPEQLQSNLNKHPPAVFVVSGDEPLLRQEACDEIRAYSRKQGFSERIVFHTPKNFDW
SALDEHTQSFSLFGEKKLLEIHLDSLPNDGGKKRLAAFSENPPEDCLMLIISDRIESSTL
NTKWFKSIETHSLHVQVWPISHDQLPNWINQRLHKLGFTPTSGAVKALCDHVEGNLLAAR
QEMEKLRLLSDDANLDEEQVLRGISNSNKFTVFNLVDACLERNPKQALKVLQTLQAESFE
PTIVLWSLAREVRLIAKLYKHSQTSQGLEQALQKERVFKNRWVLYKRFIPRFNAARLRNI
HQACQTADRSIKGLDSTPVWSTLTYAALELAGAGLSAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattaaaccggagcagctgcaaagcaacctgaacaaacatccccccgccgttttt
gtggtgagcggagatgaaccgctgttgcgccaggaagcctgtgacgagattcgcgcctac
agccgtaagcaagggtttagcgagcgtatcgtctttcacacgcccaagaactttgactgg
agcgctcttgatgagcacacccagtctttctccctcttcggcgaaaaaaagctgctggaa
attcatctggatagcttgccaaacgatggtggaaaaaagcgtctcgccgcctttagcgaa
aacccacccgaagactgcctgatgctgatcatcagcgatcgcattgagtcctctaccctt
aatacaaaatggttcaagtcaattgaaacacacagccttcacgtccaggtatggccgatc
agccatgatcaattacccaactggataaatcagcgcctgcacaaattaggattcactcct
acatccggcgctgtaaaggcattatgcgaccatgttgagggcaatttactggcggcccgg
caggagatggagaaactgcgtctattgtccgacgacgccaatctggacgaagagcaagtc
ctgcgcggaatatccaacagcaacaagttcaccgtatttaatctggtggacgcctgtctg
gagcgaaacccgaagcaggcgctgaaagtcctgcaaacgctgcaagcggagtccttcgaa
cccaccatagtgctttggtcattagcccgtgaagtgcgcctgatcgccaaactctacaag
cactcgcaaacctcccagggcctggagcaggcgttacagaaagaaagggttttcaagaat
cgctgggtcctgtacaaacgcttcatccctcgctttaacgccgcccgacttcgaaatatt
caccaggcctgccagaccgctgatagatccataaagggcttggatagcacgcctgtttgg
tctaccctgacttacgctgcattggagctggcgggcgcaggattatctgcgtcctga
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