Hahella sp. HNIBRBA332: O5O45_01950
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Entry
O5O45_01950 CDS
T09430
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh02020
Two-component system
hahh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O5O45_01950
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O5O45_01950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hahh02022
]
O5O45_01950
02035 Bacterial motility proteins [BR:
hahh02035
]
O5O45_01950
Two-component system [BR:
hahh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
O5O45_01950
Bacterial motility proteins [BR:
hahh02035
]
Flagellar system
Flagellar assembly proteins
Others
O5O45_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_24
HTH_30
AAA
MCM
AAA_2
nSTAND3
AAA_19
HTH_11
HTH_28
MerR
TIP49
HTH_23
AAA_3
FleQ
AAA_7
AAA_22
HTH_20
HTH_29
ATPase
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WLQ14697
LinkDB
All DBs
Position
388729..390132
Genome browser
AA seq
467 aa
AA seq
DB search
MNKPTLLIVEDDLELLDALTTTLEMNGYDYIGVDSAREALSVLEQRAVDMIISDVNMPGM
NGFELMLEVRRQYPGVPVVLMTAYGQISQAVAAMQSGAADYLVKPFEPQTLLDTIEKYMG
GAGGDSNADEPVAVDGASKRIFQLAQRVAMTDSTVLISGESGTGKEVLARYIHRKSTRKN
APFVAINCAAIPENMLEAILFGHEKGAFTGAYASMPGKFEQADGGTILLDEISEMDLGLQ
AKLLRVLQEREVERIGGRKSIRLDVRVLATTNRDLKTYVQEGRFREDLYYRLSVFPIHWR
PLRERRADIVPLAEHLLANHAQKMKLSFVRFDEGARQALYNHDWPGNVRELDNAIQRALI
LQQNGQITAADVCLEGVSLDSLTAPAGPGITMPEPMDEMEDLDDVSGLGQEMRMREFQII
LDTLKSEGGRRNKVAEKLGISPRTLRYKIARMRESGIDIDEQMARAC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgaccctgctgatagtggaagatgatctggagttactggatgcgctcacc
actacgctggaaatgaacgggtacgactatatcggcgtcgattccgccagagaagccttg
agcgttctggagcagcgcgccgtggatatgattatcagtgacgtcaacatgccgggcatg
aacggctttgagctgatgctggaagtacggcgtcaatatcccggcgttccggtagtgctg
atgacggcatacgggcagatcagccaggcggtggcggccatgcaaagcggtgcggcggac
tatttggtcaaaccttttgagccgcagacgctgctggacacgattgaaaaatacatgggc
ggcgccggcggcgactccaacgccgacgaaccggtggcggtggacggcgccagcaaacgg
atattccagttggcgcaaagggtggcgatgacggactctacggtgctgatctccggcgaa
agcggcaccgggaaagaagtgctggcgcgatatatccatcgcaaatccacccgcaagaac
gcgccttttgtggcgatcaattgcgcggctattccagagaacatgctggaagcgattttg
ttcggtcatgagaaaggcgcgtttaccggcgcctacgcgagcatgcccggcaagtttgaa
caggcggacggcggcaccattctgctggatgaaatttccgagatggacctgggtctgcaa
gcgaaactgttgcgtgtattacaggagcgggaagtggagcgtattggcgggcgcaagagc
attcgtctcgatgtgcgcgtgctggcgaccactaaccgggatctgaaaacttacgtgcag
gaaggccgcttccgggaagacctctattatcgcttgtccgtatttccgatccattggcgg
ccgctgcgcgagcgtcgcgcggatatcgtgcccttggcggaacatctgctggcgaaccat
gcgcagaaaatgaaattgtctttcgtgcgtttcgacgagggtgcgcgtcaggcactttac
aaccatgactggccaggcaacgtgcgtgaactggataacgccattcaacgcgctttgatt
ttgcagcaaaacggccagatcaccgcggcggatgtgtgtctggaaggcgtcagtctggac
agcctgacggcgcccgccgggccgggaataactatgccagagccgatggacgaaatggag
gacctggatgatgtcagcgggttggggcaggaaatgcgcatgcgcgaatttcagatcatt
ctcgacacgctgaagagtgagggcggacgccgcaataaagtggcggagaagctgggtatt
tcaccgcgcacattgcgctacaaaatcgcccgtatgcgtgagtccggcatcgacatcgac
gaacaaatggcgcgggcttgctaa
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