Hahella sp. HNIBRBA332: O5O45_12815
Help
Entry
O5O45_12815 CDS
T09430
Name
(GenBank) polymorphic toxin-type HINT domain-containing protein
Organism
hahh
Hahella sp. HNIBRBA332
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PT-HINT
RHS
Hint_2
Intein_splicing
Hint
AXH
Carot_N
Vg_Tdu
Motif
Other DBs
NCBI-ProteinID:
WLQ17423
LinkDB
All DBs
Position
complement(2871578..2876701)
Genome browser
AA seq
1707 aa
AA seq
DB search
MVLEPLFRQSPPHRKVSAVDFVAMGTVTVAAAAVPSQVHDRVMSVMGKVVNQIEVKRKHV
FDSLFKSYCARLTQVVLALLLLVSSNGAYAAPGIVLLEEQAYHTGGFNLREMDFWVQSKG
SPVRLSRVYKDGRGWTWNERWDRLKLKKNEVKLVLDVANGGYGSNGTNSLKLDKVVETPL
KPEEHYLRWDYIKRGDTKYEHVKGQKRFGYGGNYIEATPTGYIWHNREGEWITYDSEGVM
LKYGDAEGNEIYFKRDEAGRVAEVKDTLDRTLYSLSYVDEKSGLVKSATDYTGRTVSYHY
TNGHLTSVIDVRGYEWRYEYNDDGDLNRRIDPESNVTTYGYEDRRVDQIVYADGSSIAYE
YGYDKKYKMYLFTTRGVDGTVIDQKILDNDPEQEQKVYFVSQGGSGSSPKPKSTSVLKVK
ALFDSVAKDPKKSYGREIYSEKINGKQFSTVHYSYETGIRTLTDVYGKRTAILEDHWGNP
IKKVYPDGEEVSSTYDARFDYVTSHTNKAGIRSTYSYDSAGRMASANLAVGTDVASSVTF
AHTDDMTKATYSGKVGEAFSRYSYFDDRGNNIKQVDSEGYETLYTYDVMGNVKTMTTPRG
YTYTFEYDDAGNLLSVTDPLSRTTSYIYDKVGNVITETAPNKSKTSFTYNALNQWEEVKD
QLNQKAEHKTDPKTNTTRIASAGKSVGYIRNGMFGEPLEFVDGEGNRVEYVYDNQLLKEV
RYPTLTQKFSYNNQRLIEQVTTEYDGQSSVTSFEYDVLGQLTKKIVAGGRSVSYEYDELG
RVSVLKDADGGLTQFFYDHRSNLIKVIDPENREARLEYDTNGFIKAEVFVVEGVEHRRTY
SYDPNGNLAQVITPIGEKLVYTYDEADQLKRLEYFVNKDAALARKVVNFAYDELGLLKSY
SDGETSAVYRRDELGHLAEATVNYGPFSKTIAYTYDENGVVDSYTNPESLTYEYGYNGVG
KISTVTVPGAGVITFNSYNWGQPTSITFPGGASIERNYNGLMAFTENKLLDPASNVIMRA
VYGYDGSGNITNLSTDHGDYTYGYDNLNRLESVDYPQSTPELTDQAYTYDAAGNRLSRKS
GSSDTEVVTEELEYNDANQLVRQGEVYYHYDANGHLISKGADATGENPEYRYIYSADERL
VRVESGAGTVIAEYGYDPFGRRLWKEVAGERTYFLYNFSGLMAEYDASGNLLKEYHYLPT
STWMSDPLFMREKGEIYYYQVDHLGTPTRLIKPNGETVWEGRYDAFGEAEVVTAKVENNL
RLPGQYFDKETGFHHNFMRDYDPDIGRYIQADPLGIGGGLNRYAYSRLSPLMAFDPYGTD
YYEITDKFFDLISPKDEDGYPIPLPQGFVDGAAAIGDNAISTVSGGLVSGQEIRNWLGID
GGVNMCSGMYRFVDFAAGFIPWGGPAKGISRLTRSRKTSNLSKGNKTSGTKNNTGPACQC
FVAGTLVETAEGKVAIEEIEVGDQVYARDEITGETQLRMVLNTIQNQDKQIVTITVRDSE
GHQEEINTTPEHPIWVEGESWSRADKLEEGDKLTTFDGHSFEVISLSYLLERQPTFNITV
EGNHNYFVGNGGIWVHNSVVCDLTSSPGRVQTRINLAKGHTRTTPKRRSGHPVSAGFDHV
VDQHFNRSLENNRSIFSITPSELKNVLQSKNVVNSPVTDIGGGQFVRVVDTGRTIGNASL
NHGGGATSRMKVITDKAGNLITAYPVR
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
ttggttctggaacctctgtttcgccagagcccgccacatcgcaaggtgtcggcagtggat
tttgtggcgatggggacggtaactgtggcggcggcagcggtaccgagtcaggttcatgac
agggtaatgagtgtaatgggaaaagtagtaaatcagattgaagtaaagagaaaacacgtg
ttcgactcattgtttaaaagttattgcgccagactgactcaagtggttctagcccttttg
ctgctggtgagctctaatggcgcttatgcggctcctggcattgtgctgcttgaagagcag
gcgtatcacactggtggattcaatctgcgggaaatggatttctgggtccagtctaagggg
agccctgtacgactctcccgcgtttacaaagatggtcgtgggtggacctggaatgagcgt
tgggacagacttaagctcaaaaaaaatgaagtaaagctggtgcttgatgtcgccaatgga
ggatatggcagtaatggtacgaacagtctaaagctggataaggtcgttgaaacgccgctt
aagccagaagagcactatttacgttgggactatattaaacgcggcgacacaaagtatgaa
cacgtcaagggacaaaagcgatttggctatggcggcaattatatagaggccactccgact
ggctacatttggcataacagggaaggagagtggattacctatgactccgaaggggtcatg
cttaaatatggagatgccgaaggcaatgaaatatattttaagcgtgatgaagcgggaaga
gtcgctgaggttaaagatactcttgatcgcaccttatactcccttagctatgttgatgaa
aaaagtggtctggtaaagtccgccaccgactatacagggcgaacagtcagttatcactac
actaatggtcatcttacttcggttattgatgtaagggggtatgagtggcgatatgaatat
aatgatgatggtgacctgaatcggcgaattgatcctgagagtaatgtaacgacatacggc
tatgaagatcgtcgagtcgatcagattgtatatgccgatggcagcagtatagcctatgaa
tacggatatgataaaaagtacaagatgtatctgttcactactcgcggtgtggacggaacg
gttattgatcagaaaattctggataatgatcctgagcaagagcagaaagtctactttgtc
tcacagggtggaagcggttcttcaccaaagcctaaatccacctctgtcttaaaggtaaaa
gctctttttgacagtgtcgcaaaggaccccaaaaagagttatggaagggaaatatattct
gaaaaaataaatgggaagcagttctcaactgttcactattcttatgaaaccggcattcgc
actttaacggatgtatatggaaaacggaccgccattcttgaggaccattggggcaatccc
attaagaaggtctatccagatggtgaggaagtcagcagtacttatgatgcaagatttgac
tatgtaacctcgcataccaataaggccggtattcgctcaacatacagttatgattccgcg
ggcagaatggcgtccgcaaatctggcagtgggcacggatgtggccagtagcgttacattt
gcgcatacggatgatatgacaaaagccacctacagtgggaaagtaggtgaagcattcagc
agatattcatacttcgacgaccgcggcaacaatatcaaacaagtcgatagcgaaggctat
gagactttatatacctacgacgtcatgggcaatgttaagaccatgaccaccccgcggggc
tatacctatacctttgaatatgacgatgccggcaacctgttatccgtaaccgatccgctc
tcccggacgaccagttacatctacgataaagtgggcaatgtcattaccgaaactgcgcct
aataaaagcaaaacttcttttacatataatgcgcttaatcagtgggaagaagtcaaagac
cagttaaatcagaaggcggaacacaaaactgatcccaaaaccaatacgacccgcattgct
tctgccgggaaatccgttggttatattcgcaatggaatgtttggcgagccgctggagttt
gtggatggcgaggggaacagggttgagtatgtttatgataaccagcttctgaaagaagtt
cggtatcccaccttaacgcagaagttttcctacaataatcagcgtctgattgagcaggtc
actacggagtacgatgggcaaagctccgtcaccagctttgaatatgacgtgctggggcag
ttgaccaaaaaaatcgtcgcaggcggccgttctgtttcctatgagtacgatgaactgggc
cgggtaagcgttttgaaagacgcggacgggggattgactcagtttttctatgaccatcgc
agcaacctgattaaagtcattgacccggaaaatcgggaagcgcgactggaatatgatact
aacggttttatcaaagccgaagtctttgtggtcgagggcgttgaacatcgacgcacttac
agctatgaccctaatggcaaccttgcgcaggttatcactcccatcggagagaagctggta
tacacctacgacgaggcggatcagctaaaacggctggagtactttgtcaataaagacgcc
gccctggcgcgcaaggtcgttaatttcgcctatgacgagctgggcctgctgaagagctac
agcgatggcgagacttctgctgtttaccgtcgcgacgaattgggtcatctcgctgaggcg
acggtcaattatggtccattcagcaaaaccatcgcctatacctacgacgaaaacggggta
gtggacagctataccaaccctgaaagcctgacctatgagtatggctacaacggggtgggt
aaaatatctacggtgacggtaccgggcgcgggcgttattacattcaatagctacaactgg
ggacagccgacttccatcaccttcccgggcggcgcgagcattgagcgcaactacaacggt
ctgatggcctttacggaaaacaagctgcttgaccccgccagcaatgtcattatgcgtgcg
gtctatggctacgatggctccggcaatatcaccaacctttcgactgaccacggcgattac
acatacggctatgacaacctgaaccgtctggagtcagtcgattatccccaatccaccccg
gaactgactgatcaggcttatacctacgacgcagcaggcaaccgcttgagtcgtaagagc
ggctctagtgacactgaggttgtcactgaggaactggagtataacgacgccaaccaactg
gtgcgtcagggtgaagtttattatcactacgacgccaacggccatttaatcagcaaaggc
gcggacgctaccggagagaatccagaatatcgttacatctacagcgccgacgaacgtttg
gtgcgcgtcgaatctggcgccgggacggtgattgccgaatacggctatgatccattcgga
cgccgcttatggaaggaggtagctggcgagcgcacttatttcctgtacaacttctcaggg
ttgatggcggaatacgacgcctcaggtaatctgctcaaagagtatcactacctgcctacc
agtacctggatgagcgatcccctgttcatgcgcgaaaaaggggagatttattactatcaa
gtggaccatctgggcacgcctacccgtttgatcaaacccaatggcgagacggtctgggaa
ggtcgttacgacgcgtttggcgaagcggaagttgtaaccgccaaagtagaaaacaatctg
cgtttacccggccagtatttcgataaagaaaccggtttccaccataactttatgcgggat
tacgatcccgatataggccgctatatccaggctgatcccctcggtattggcggaggcttg
aacaggtacgcgtactcccggttaagtccgctaatggctttcgatccttatggaactgac
tattatgagataactgataagtttttcgatttaatttcaccaaaagatgaggacggctac
ccaatacccttacctcaaggttttgtggatggcgctgctgccattggtgataatgctatt
tccacagtgagtggtggcctcgtctctgggcaggaaatcagaaactggctgggcattgac
ggtggcgtcaatatgtgctccggcatgtaccgctttgtagacttcgcagcaggctttatc
ccttggggcggtccggccaaaggtatcagcaggcttacgcgctcaagaaagacgtctaat
ctcagcaaaggcaataaaacttctggcaccaaaaacaataccggtccggcctgtcagtgt
tttgtcgctggcactctggttgagacagctgaagggaaggtcgccattgaagagattgaa
gtcggcgaccaagtatatgccagggatgagataacaggagaaacgcagcttagaatggtt
ctgaatactatccagaatcaagacaagcagattgtaactattacagtaagggattccgaa
ggacatcaggaagagataaatacgactccagaacatcctatttgggttgaaggtgaatcc
tggtctagggctgataagctggaagaaggtgacaagctaacaacttttgatggccattct
tttgaagttatttctctaagttatctattggaaaggcagccaacctttaacattacagtt
gagggtaatcataattactttgttggaaatggcggaatttgggttcacaactccgtcgtc
tgtgatttaactagcagtcctggtcgggtgcaaactagaataaatcttgcaaaaggacat
acacgaacaactccaaaaagaagaagtgggcatccggtttcagctggatttgatcatgtt
gtggaccagcattttaataggtcactagaaaataatagatcaatattttctataacacca
tcagagcttaaaaatgtacttcaaagtaagaacgttgtgaactcgcctgttacggatata
ggaggagggcagtttgtccgggttgtcgatactggccgtacaattggaaatgcatctctc
aaccatggtggaggggctactagccgaatgaaagtgattacagataaagcaggaaatcta
attactgcctatcctgttcgataa
DBGET
integrated database retrieval system
