Hahella sp. HNIBRBA332: O5O45_17050
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Entry
O5O45_17050 CDS
T09430
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hahh
Hahella sp. HNIBRBA332
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hahh03016
]
O5O45_17050
Enzymes [BR:
hahh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
O5O45_17050
Transfer RNA biogenesis [BR:
hahh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O5O45_17050
Prokaryotic type
O5O45_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WLQ11454
LinkDB
All DBs
Position
complement(3853538..3854506)
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AA seq
322 aa
AA seq
DB search
MNFDLNFPGLWTDLAPGIWRQTPEDFGVNELWTPPDSGGEHILLHVEKRGQNTEWVSRNI
ARFCGVRDFDIGLMGLKDRHAVTRQWFSVYLGKRPEPDWSQLQIEGVEVLSVTRTQKKLR
RGDHSGNAFKIWVRQVEGAHEQIDEKLSFIKANGFPNYFGDQRFGHDGYNLQRAHAWFVE
GQKPKKKAHLGMYLSAARSYLFNEVLAERVRRGDWSTMIEGDEGAPAASSVACEIIVPTG
PMLGGAEFLSGMAGEVEQQRTASLSEWLTAIHKDGARTARRPFVAKPVDMSWQWLNNDIE
LTFSLGSGCFASVLLDQVFRLN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatcttaacttccctggactttggactgacttggcgcctggaatatggcgt
caaacaccggaagacttcggcgtgaatgaattatggacgcctccggattcaggaggagag
catattttattacatgttgaaaaacgcgggcagaataccgagtgggtgtctcgcaatatc
gcgcgcttttgtggcgtgcgtgatttcgatatcggactgatgggattgaaggatcgtcat
gcagtgacgagacaatggttttccgtttatttagggaaacgtcctgagccagattggagt
cagttacagattgaaggtgtagaggttctcagcgttactcgtacgcaaaaaaaattacgc
cgtggagatcactcaggaaatgcttttaagatttgggttagacaggtggaaggcgcccac
gagcaaatcgatgaaaagctgtcattcattaaggcgaatggttttcctaactatttcgga
gatcagcgctttggtcatgatggctataacttacaacgtgcgcatgcatggttcgtagaa
ggccaaaaaccaaaaaagaaggcccatctgggtatgtatttatctgcggcgcgttcttac
ttgtttaatgaagttctggctgagcgcgttcgacgaggtgactggtcgacaatgattgag
ggggatgaaggtgctcccgccgctagttctgtggcgtgcgaaatcatcgttcccactggc
cctatgctagggggggctgagttcttgtccgggatggccggagaggttgagcaacagcga
acggcgtctttatcagagtggctgaccgcaattcacaaagacggcgcgcgtacagcgagg
aggccttttgtcgccaagcctgtagatatgagctggcagtggctcaataacgatattgag
ttgacgttttctcttggctccggctgtttcgcctctgtattgctggaccaagtatttaga
ttaaactga
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