Hahella sp. HNIBRBA332: O5O45_17125
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Entry
O5O45_17125 CDS
T09430
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03030
DNA replication
hahh03430
Mismatch repair
hahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O45_17125 (dnaE)
03430 Mismatch repair
O5O45_17125 (dnaE)
03440 Homologous recombination
O5O45_17125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahh03032
]
O5O45_17125 (dnaE)
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_17125 (dnaE)
Enzymes [BR:
hahh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O45_17125 (dnaE)
DNA replication proteins [BR:
hahh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O5O45_17125 (dnaE)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O5O45_17125 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
T2SSK
HROB
HPD
Motif
Other DBs
NCBI-ProteinID:
WLQ17442
LinkDB
All DBs
Position
complement(3869752..3873228)
Genome browser
AA seq
1158 aa
AA seq
DB search
MGDFIHLRIHTEFSLVDGLVKVKPLVKKLADMGMPAVAVTDQSNMCCLVKYYKAAAGAGV
KPVVGADVWVENLDDPLAPFRLTLYARNETGYRNLTELISRGFTEGQSHGKAILRKDWIA
AQAEGMLAMSGAKYGDVGQALLAGKLELARERLAFWMEMFPDAYYLELQRTGRINDEECV
HASVELAMETGCPVVATNDVHFLERDDFEAHEARVCIHESRTLDDPRRERRFSEEQYLKS
ADEMRELFSDIPEAIENTVEIAKRCNVSLRLGKYFLPNYPIPEGMTIDEFFIKVSEEGLE
ERLATLFKRDDPEYDNKRRSYYDRLKFELDIITQMGFPGYFLIVMDFIKWAKNNGVPVGP
GRGSGAGSLVAYALKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIAYVAE
AYGRNAVSQIITFGTMAAKAVVRDVARVQGRPYSMGDRLSKLIPFEVGMTLAKAYEQEEP
LREYLTTDEEAAEIWEMARKLEGVTRNVGKHAGGVVIAPTKLTDFAPLYCDETGSGLVTQ
FDKDDVEQAGLVKFDFLGLRTLTIVDWAVDIINRQQAEKGEPPLDINFIPLDDAPTFNLL
KHGETTAVFQLESRGMKELIRRLMPDCFEDIIALVALFRPGPLQSGMVDDFINRKHGRAE
LAYPHPDYQLESLKPVLQPTYGIILYQEQVMQIAQVMAGYTLGGADLLRRAMGKKKPEEM
AKQKAIFVEGSINQGIDQDLAEKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKCHYPA
PFMAAVLTADMQNTDKVVTLVEECRRMKLDLVLPDVNNSSYTFTVDDKNRIVYGLGAVKG
LGEGPVQSILDAREEGGPFRDLFDFCQRVDLRRVNKRALEALVRSGAMDKLGPNRARMMA
SINEAVRRADQHSRNEDAGMLDLFGEVVPETDPNPYSATEGMQEWSDKERLKLEKETLGL
YLTGHPFDEYEQEVRRFVRTPISELRPGKSPQNVAGLVVAVRTMKSKRGGYIGFATLDDR
SGRIEVTFFSDAYEQAKEMLHNDRILVVEGVVGEDDYSGGLSVRAKMTSDIGQARLKFAK
ELILFVHEKDFNNGFIDELGGVLGEHRAEGCPVLINYETETARTRLRLAEDWRVNPSDEL
IQGLRYLLGKERVQLRYS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattttattcatttacgcattcatacagaattttctctggttgacggactggta
aaggtcaaacctttggtcaaaaaactggccgatatggggatgcctgcggtggcggtgacc
gatcagtccaacatgtgctgtctggtcaaatactacaaagcggcggcgggcgcaggcgtg
aaaccggtggtcggcgccgatgtctgggtggaaaacctggatgatcctctggccccgttt
cgactcactttatacgcccgcaatgagaccggctaccgcaacctgacggagctcatatcc
cgcggctttactgaggggcagtcccacggtaaagccattttgagaaaagactggatcgcc
gctcaggcggaaggcatgttggcgatgtccggcgccaaatatggcgatgtcggtcaggcg
ttgctggcgggtaagctggagctggcgcgcgagcggctggccttttggatggaaatgttc
ccggatgcgtattatctggagctgcaacgcacggggcggatcaatgatgaagagtgcgtg
cacgcctctgtcgaattggcgatggaaaccggctgtccggttgtcgccaccaacgatgtg
catttccttgagcgtgacgactttgaagcccatgaggcaagggtgtgtatccatgaaagt
cgcactttggacgacccacgtcgggagcgccgcttcagcgaagagcagtacctgaagtcg
gctgacgaaatgcgcgagctgttttcggatattcccgaagcgattgagaataccgtggag
atcgccaagcgctgcaacgtcagtctgcgtctgggtaaatacttcctgcctaactacccc
attccagaaggaatgaccattgatgaatttttcatcaaagtctcagaagaggggctggag
gagcggctggccacgctgtttaagcgtgatgacccagaatacgacaataaacggcgaagc
tattatgaccggcttaagtttgagctggacatcatcacccagatggggttccccggctac
ttcctcatcgttatggacttcattaaatgggccaagaacaacggcgtgccggtgggcccg
ggacggggctccggcgccggctctctggtggcctatgcgttaaaaatcacagacctggat
cctctcgcctacgacttgctgttcgagcgattcctaaacccggaacgggtatcgatgccg
gactttgacgtcgacttctgtatggaaggccgcgaccgcgttatcgcctacgtggccgaa
gcctatgggcgtaatgcagtgtcccagatcatcaccttcggaaccatggcggcgaaggcg
gtagtgcgggacgtagcgcgggtgcaggggcggccgtattccatgggtgatcgcctgtcc
aagctgatcccctttgaagtgggcatgactctggccaaagcgtatgaacaagaagagccg
ctgcgagaatatctgaccacggatgaagaagcggcggaaatctgggagatggcgcgcaag
ctggagggggttacccgtaacgtcggtaagcacgccggtggtgtggtgatcgcgcccacc
aaattgacggactttgcgcccttgtactgtgatgaaaccggctcggggctggtgacgcag
ttcgataaggacgacgtagaacaggcggggctggtcaagttcgacttcctggggctgcgt
acgttgaccatcgtcgactgggcggtggacatcattaaccgtcagcaggcggaaaaaggc
gaaccaccgctggatatcaactttatcccattggatgacgcgccaactttcaatctgctc
aagcatggtgaaaccactgcggtgttccagcttgaatcccgcggaatgaaagaacttatc
cgacgtctgatgccggactgctttgaagatatcatcgctcttgtggccctgttccgtccg
gggccgctgcaatcgggcatggttgacgactttatcaaccgtaagcatgggcgcgccgag
ttggcctacccgcatccggattatcagctggagtctttgaaacccgtcctgcagcccacc
tacggcatcatcctgtatcaggaacaggtaatgcagatcgcccaggtaatggcgggttac
acccttggcggcgcggacttgctgcgtcgagccatgggtaaaaagaaacctgaggaaatg
gccaagcaaaaggcgatcttcgttgaaggaagcatcaaccagggtattgatcaggatctg
gcggaaaagatctttgacctggtggagaagtttgcgggttacggtttcaacaagtcgcac
tccgctgcttacgccttggtgtcttaccagactgcctggctgaagtgccactatcctgcg
ccgttcatggcggcggtgcttaccgcggatatgcagaacaccgataaagtggtgacgctg
gtggaagagtgtcggcggatgaagctggacttggtgttgccggacgtcaacaacagcagt
tataccttcaccgtcgacgataagaatcgcattgtctacggtctgggcgccgtaaaaggg
ctgggtgaaggccctgtgcaaagtattttagacgcccgcgaagaaggcggtccctttcgc
gatctgttcgatttctgtcagcgggtggatttgcgccgggtcaacaagcgcgctctggaa
gcgctggtccgctccggcgccatggataaactggggccgaaccgcgcccgtatgatggcg
tctatcaatgaggccgtgcgtcgggcggatcaacactcccgtaatgaagacgccggtatg
ctggacttgttcggtgaggtggtgccggaaaccgatccgaacccctacagcgcgacggaa
ggcatgcaggagtggagcgataaggaacgcctgaaattagagaaggagactctgggcctt
tatctgacgggtcacccgtttgatgaatacgagcaggaagtgcgccgcttcgtgcgtacg
cccatttcggaattgcgtcccggcaagagtccgcaaaatgtcgcgggcctggtagtggcg
gtgcgcacgatgaagagtaaacgtggcggatacataggttttgctacgttagatgatcgt
agcggccgtattgaagtgacttttttctccgacgcctacgagcaagccaaagaaatgctg
cacaacgatcgcattctggtcgtggagggcgtcgttggcgaagacgactactctggtggg
ctttctgtccgggcgaaaatgacttcggacatcggtcaagcacgattgaagttcgccaaa
gagcttattctctttgtacacgaaaaagactttaataacggctttattgacgaactgggc
ggcgttttgggagaacatcgcgccgagggctgcccggttttgatcaattatgaaacggaa
accgcccgcaccagactgcgtctggccgaagattggcgggttaatccaagcgatgaattg
attcaggggctgcgatatttgttgggcaaggagcgggtgcaactgcgctacagttga
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