Hahella sp. HNIBRBA332: O5O45_17465
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Entry
O5O45_17465 CDS
T09430
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03410
Base excision repair
hahh03430
Mismatch repair
hahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O5O45_17465 (recJ)
03430 Mismatch repair
O5O45_17465 (recJ)
03440 Homologous recombination
O5O45_17465 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_17465 (recJ)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
O5O45_17465 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O5O45_17465 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O5O45_17465 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WLQ17443
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All DBs
Position
complement(3954041..3955735)
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AA seq
564 aa
AA seq
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MEFLNHSGLPPVLQRIYAARGVASCDELEYSLSHLLQLDSLAGAQSAAAILAEALQRNQR
IIFVGDFDADGATSTALGVLALRMFGAAYVDYIVPNRFEFGYGLSPEIVEVALSRQPDVL
ITVDNGIASIEGVKAAKRAGLRVIVTDHHLAGDELPEADAIVNPNQPGCDFPSKSIAGVG
VIFYVMLALRQALRDKGWFAATGMIEPNLANLLDLVALGTVADVVSLDANNRILVEQGLR
RIRAKRCRPGINALLQVAGRSQEKLSASDLGFAIAPRLNAAGRLEDMTVGIELLLTEDPA
KALMIAQELDGLNQARKEIERDMQAQALSILDRMNWTYDNPPAAVCLYDESWHQGVVGIL
ASRIKDRMHRPVIAFAPGDNGELKGSARSIPGLHIRDALDAVATKHSGLLSKFGGHAMAA
GLSLRPENFTAFSEAFQEVVAAAVSVDDLQAKLLTDGELSPEELCMNMAITLKNAGPWGQ
SFPEPLFEGQFRIASCRIVGERHLKMTLADHRSGNCYDAIYFNIDPATPFSEWDRVKVVF
RLDVNEFRGHSNLQLLIEYLEPCN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaattccttaatcattctggacttcctcccgtgctgcaacggatctatgccgccaga
ggcgtcgccagttgcgatgagttagagtattcattaagccatttgctgcaattggatagt
ctggctggcgcgcaaagcgctgcggctattcttgcggaagccttgcagcgcaaccagcgc
attattttcgtaggcgactttgacgctgacggcgcaaccagcacagctttgggggtgctg
gcgctgcgtatgtttggcgctgcttatgtggactacattgtccctaatcgttttgagttc
ggctatggcctttctccagagattgtagaagtggcgctgtcacgtcagccggatgtgttg
attacggtggataacggcatcgccagcattgaaggcgtcaaagccgccaagcgggcggga
ttgcgagtcattgtgacagaccatcacttggcgggtgacgagttgccggaagctgacgcc
attgttaaccctaatcaaccgggttgcgactttcccagcaagtctatcgccggggttggg
gtgattttctacgtgatgctggcgttgcggcaggcgctgcgtgataaggggtggttcgcc
gctaccggtatgatagagcccaatctggctaatttattggatttagtcgcactggggaca
gtggccgatgttgtgtctttggacgccaataaccgcatactggtagagcagggtctccgg
cgcatccgcgccaagcgctgtcgtcccggcattaatgctctactgcaagtggctggacgc
agtcaggaaaaacttagcgcttctgacctgggattcgcaattgctccgaggctcaatgca
gccggacgtctggaagatatgaccgtcggcatagagttgctgttgacggaggaccccgcc
aaggccttgatgattgcgcaggagcttgatggattaaatcaggcgcgcaaagaaatagag
cgtgacatgcaggctcaggcgctatcgattctggaccgcatgaactggacttacgacaac
cctccggccgcagtgtgtctttatgatgaaagctggcatcagggcgtggtggggattctg
gcttctcgcatcaaggatcgcatgcaccgcccggtcattgcttttgcgccgggagacaat
ggcgagcttaaagggtcggcccgatcaatacctggattgcatattcgcgatgcgttggat
gctgtggcgactaagcatagtgggctattatccaagtttggtggtcacgctatggcggcg
gggttgtctctgcggccagaaaatttcaccgctttttcggaggcgtttcaagaggttgtc
gcagcggctgtaagtgtggacgacctgcaggcgaagctcttgacggatggtgagctgtct
cccgaagaactttgcatgaatatggcgattactttgaagaatgcggggccgtgggggcaa
tccttcccggaacccttgtttgagggccagttccgtatcgccagttgccgaattgtcggc
gagcgccatctcaaaatgacgctggcggatcatcgctcaggcaactgctatgacgctata
tactttaatattgatcccgcgacgccgttcagtgaatgggatcgggtgaaggtggttttc
aggctcgacgtaaatgaattccgcggacatagcaatctgcaactgctaattgagtatctg
gagccttgtaattag
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