Hahella sp. HNIBRBA332: O5O45_17830
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Entry
O5O45_17830 CDS
T09430
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
hahh
Hahella sp. HNIBRBA332
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hahh03000
]
O5O45_17830 (rtcR)
Transcription factors [BR:
hahh03000
]
Prokaryotic type
Other transcription factors
Others
O5O45_17830 (rtcR)
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
AAA_19
AAA_30
ATPase_2
AAA_2
NTPase_1
AAA_18
NACHT
MCM
T2SSE
AAA_14
AAA_7
BrxC_BrxD
TniB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WLQ11594
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Position
4027610..4029244
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AA seq
544 aa
AA seq
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MKSKNIVLSILGTTLDVVSKRRGKFEKRWERWRPNVSITQRAEVFPVDELHLLSASKDMA
LAEEVSADINVVSPDTHVAIHDVSFTSPWELEVTYLQLRDFLTDFRFDPSANYFFHITTG
SHIQQIVIFLLHESRLFPGKLLQTAPPKEGSTEPRHQIIDLDLSKYDAIAERFRKDHLEG
EDFLKSGIQTRNPAFNRMIQQIELVAQRSIAPMLITGPTGAGKSHIARRIYELKKKRNLV
SGDFVETNCATLVGDNAMSTLFGHKKGAFTGAVDKRDGLLKRADKGMVFLDEVGELGLDE
QAMLLRAIEDKCFLPMGADLEEKSDFQLIAGTNKDLRKEVQAGRFREDLFARINLWTYRL
PGLAERKQDIEPNIDYELDRFERNHGERVTFNKEARARYLEFALSPEALWPANFRDLNAS
IVRMATLADKGRIKTDHVDEELQRLRYLWSHAESPAMASSLSLDDFLAQYLDLEQLEHVD
YIEKVQLKAVIEVCRNCRDGAEAGRTIYNASRLRKKQTNDSHRLRQYLAKYGLHFDSIRQ
VNSV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaaaatatcgtcctatccattctcggtacgactttggatgtcgtgtccaag
cgtcgcggtaagtttgagaagcgctgggagcgctggcggccgaatgtctccatcactcag
cgcgctgaggtcttcccggtggatgagctgcatttgctcagcgccagcaaagacatggcg
cttgctgaagaagtctctgcggatatcaatgtcgtcagcccggatacacatgtcgccatc
cacgacgtcagctttacctccccatgggagctggaggtcacctatctgcagttgcgagac
tttcttaccgacttcaggtttgaccccagcgccaattattttttccacatcactactggc
tcgcatatccagcagatcgtgatcttcctgttacatgagtcgcgcctttttcccggtaaa
ctgttgcaaacagcgccgccgaaggagggctcaactgaaccgcgccatcagattatcgat
ctggatctttccaagtacgacgcgattgcggagcgatttcgcaaggaccatcttgaaggc
gaagattttctgaaatccggcattcagactcgcaacccggcgttcaaccggatgattcag
caaatcgagctggtcgcgcagcgttctatcgcgcctatgttgatcaccggtccgactgga
gccggtaagtcccatatcgcacgccgcatttatgagctgaagaaaaaacgtaatctggta
agcggcgactttgtggaaactaactgcgccaccctggtgggcgacaacgcgatgtccacc
ttgttcggccacaagaaaggcgcatttaccggggccgtggataagcgggacggcttactg
aaacgcgcagataaaggcatggtgtttcttgatgaagtcggcgagctgggcctggatgaa
caggccatgctgttacgcgccatcgaagataaatgctttctgcccatgggcgcggacctg
gaggagaagagcgattttcaactgatcgccggcaccaataaagatctccgcaaagaagtg
caggcaggccgctttagagaggacctgtttgcgcgcatcaatttgtggacttaccgcctc
cccggactggcggagcgaaaacaggacatcgaacccaatatcgactacgaactggaccga
tttgaacgcaaccatggcgagagagtgacgttcaacaaagaagcccgcgcccgctatctt
gagttcgcactgtccccagaagcgctttggcccgccaacttccgcgatctcaacgccagc
atcgtgcgcatggccactctggcggacaaagggcgcatcaagacggatcatgtagacgag
gagctgcagcggttacgttacctgtggtcccatgcggagtcgccggccatggcgagcagc
ttatctctggatgactttctggcccaatatctcgacctagaacagcttgagcacgttgat
tacattgaaaaagtgcaactgaaagctgtcatcgaagtgtgcagaaattgccgggacggc
gcagaggcgggacgcaccatttacaatgcatcccgactacgcaaaaaacagacaaacgac
tcccatcgattgcgtcaatatctggccaagtacggccttcactttgacagcatcaggcaa
gtcaattcagtctga
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