Hahella sp. HNIBRBA332: O5O45_20195
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Entry
O5O45_20195 CDS
T09430
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hahh
Hahella sp. HNIBRBA332
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hahh03016
]
O5O45_20195 (truB)
Enzymes [BR:
hahh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
O5O45_20195 (truB)
Transfer RNA biogenesis [BR:
hahh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O5O45_20195 (truB)
Prokaryotic type
O5O45_20195 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WLQ12051
LinkDB
All DBs
Position
complement(4562037..4562972)
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AA seq
311 aa
AA seq
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MARRKKGVPLDGVLVVDKPQDWTSNAVLQKVKYALNAQKAGHTGALDPLATGVLPLCFGE
ATKFSQLLLDSDKEYVTCAYLGRTTTTSDAEGDIISESSIPDLSISELENILEQFRGILK
QVPSMYSALKHKGTPLYKLARQGIEVEREARDIVIHELELLEYTPPYLRLRVLCSKGTYI
RNLVEDIGQVIGCGAHVAELRRTRCGPFVLEDSVTFAPFEDESGRQAAAEEYQRRLLPVD
SSVRYFPEILLDEANTGSIIQGQTVKISPLSSEGKVRLYSGGRRFIGLGEVMSDGTVKPV
RLLNVSALSAE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaggcgtaagaaaggcgtgcctttagatggcgtattggttgttgataaaccgcaa
gactggacttccaatgcggttttgcaaaaggttaagtatgcgctgaatgcgcagaaggcg
ggccatacaggagccttggatcctcttgcgaccggagtgcttcctttgtgtttcggtgaa
gcgaccaagtttagccagctgctgttagattccgataaagaatacgtgacgtgcgcttac
cttggtcgcactaccaccacgtctgacgccgagggcgatatcattagtgagtcgtctatt
cctgatctgtctatttccgaattggaaaacatccttgagcaatttcgggggattctaaaa
caggttccctccatgtactctgcgcttaagcacaaaggaactccgctttataagcttgcc
aggcaaggcattgaggtcgagcgtgaagcgagggacatcgtaattcatgagcttgagctt
ctggagtatacgccaccgtatttacgtttgcgggttctttgcagtaaagggacgtatatt
cgaaaccttgtggaggatattggtcaagttataggatgtggtgcgcatgtggccgaattg
cgacgcactcggtgcggaccatttgtgctagaggatagcgtcacctttgcgccatttgag
gatgaaagtggacgccaggctgctgcagaggaatatcaacgacgtttgctgcctgttgat
tcatcggttcggtatttccctgaaatattgttggatgaagctaatacaggctcgattatc
caagggcaaacggttaaaatatcgcctctctcaagcgagggtaaggtgcgtttgtattct
ggcggacgtagatttattggcttgggagaagtgatgagtgacggaacggtaaagcctgtt
cggttactgaatgtgagcgcactaagcgctgaatga
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