Hahella sp. HNIBRBA332: O5O45_21715
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Entry
O5O45_21715 CDS
T09430
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hahh
Hahella sp. HNIBRBA332
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_21715 (sbcD)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O5O45_21715 (sbcD)
Archaeal homologous recombinant proteins
O5O45_21715 (sbcD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WLQ12348
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Position
complement(4918857..4920173)
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AA seq
438 aa
AA seq
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MTFRILHTSDWHLGQHFFGKTRADEHAMFFNWLLEQVQVHEVDALIVAGDIFDTGAPPSY
ARELYNRFVVELQRTDCQLVLLAGNHDSVATLNESKDLLACLNVHVVAGMPETPENNVLL
LNDRNEEPGAILCAVPFLRQRDLTTSKAGQDGVEKQQALQQAIADYYARLFQLAQARREE
FGEALPIIATGHLTTVGAELSDSVRDIYIGALDAFPSGAFPPVDYIALGHIHRSQKVGGQ
EHIRYSGSPIPLSFDEAEQTKSVLMVDFEDGRLQQVTPLETPCFQPMQVIRGDLKSIEKQ
LGSIVAPNSQLSLFSNADKVWVDIEVAATQDYLDDLQRRIQDMVGALPVEVLLVRRERKN
KGLRLERLEKETLAELTVEEVFERRLAQEVWEGEDAEARRQRLMGMFRQVESDVLADGVE
ADVVAESSVETSVTGGDA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcgtattcttcatacctcggactggcatcttggccagcattttttcggtaaa
acgcgggcggatgagcacgccatgtttttcaactggctgttggagcaagtccaggtacat
gaagtggatgctctgatcgtcgcgggtgatatttttgacaccggagcgccgcccagttat
gcgagggagctatacaaccgctttgtcgtggagttgcagcggactgactgccaattagtg
ctgttggcgggcaatcatgactccgtcgccacgctgaatgaatccaaagatctgctggcc
tgcctgaatgtgcatgtcgtggcgggtatgccggaaacgccggaaaacaatgtgttgctg
ctgaatgaccgcaatgaggagccgggcgccattttgtgtgcggttcctttcctgcggcag
cgggatctcaccaccagtaaagcgggacaggatggtgtggagaaacagcaggctttgcag
caggcgattgccgactactatgcacgcctgtttcagttggcgcaggcgcgccgcgaggag
tttggcgaggcgctgccgatcatcgctaccggtcatctgacgaccgtgggagcggaactc
tctgattcggtgcgggatatctatattggcgcgttggatgcttttccatctggagctttt
cctcccgttgactacattgctttaggccacattcatcgctcacagaaggtgggcggtcag
gagcatattcgctatagcggttcgccgattcctctgagttttgacgaagcggagcaaacc
aagtcagtgttgatggtggactttgaagatgggcgcctgcaacaggtgacgccgctggag
accccctgctttcaacccatgcaggtgattcgcggcgacctgaaatcaatagaaaagcaa
ttgggctctattgtcgcccctaattcgcaactgtcgctgttcagtaatgcggataaggtc
tgggtcgatatcgaggtggcggcgactcaggattatctcgatgatttgcagcgtcgcatt
caggatatggtcggcgcattgccggtggaagtgcttttggtgcggcgtgagcgcaagaat
aaggggctcaggctggagcggctggagaaagaaaccttggcggagctgacggtggaagaa
gtttttgagcgccgcctcgcccaggaagtctgggaaggcgaggatgcagaggcgcgacgg
cagcgtctgatgggcatgttccgtcaggtagagagtgatgtgctcgcggacggtgtggag
gcggatgttgtcgctgaatccagtgtcgaaacctctgtgacggggggcgatgcatga
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