Hahella sp. HNIBRBA332: O5O45_24030
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Entry
O5O45_24030 CDS
T09430
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O45_24030 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahh03021
]
O5O45_24030 (rho)
03019 Messenger RNA biogenesis [BR:
hahh03019
]
O5O45_24030 (rho)
Transcription machinery [BR:
hahh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
O5O45_24030 (rho)
Messenger RNA biogenesis [BR:
hahh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
O5O45_24030 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA
Fungal_virus_P2_C
AAA_22
S1CSD-TOTE-2
Spore_III_AA
AAA_25
DUF3086
ResIII
Motif
Other DBs
NCBI-ProteinID:
WLQ12799
LinkDB
All DBs
Position
complement(5430402..5431664)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKKKPVPELLTIAEEMGLENMARSRKQDVIFSILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKDGERYFALLKVNEIN
FDKPENARNKILFENLTPLFPQERLRLEAGNGSTEDLSARILDLVAPIGKGQRGLIVSPP
KAGKTLLMQNIAQSITRNNPETHLMVLLIDERPEEVTEMQRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTIIPSSGKVLTGGVDAHALERPKRF
FGAARNVEEGGSLTIVATALIDTGSKMDEVIYEEFKGTGNLEVHLDRRISEKRVFPAINI
RRSGTRREELLMSEEELQRVWILRKLLHSMEDDIAAVEFLLDKLKDTKTNDEFFQAMKKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactgaattaaaaaagaaacccgttcctgagctattaaccatcgccgaagaa
atgggcctggaaaatatggctcgctcccgcaagcaggatgtgattttcagtattttgaaa
aagcacgccaaaagcggcgaagacatctacggcgatggcgttctggaaatcctgcaggat
ggcttcggcttcttgcgttccgcggacagttcctacctggccggccctgacgacatttac
gtctcacccagtcaaatccgccgttttaacctcagaacgggcgatacaatcgccggtaag
attcgaccgccgaaagacggcgagcgttatttcgcactgttgaaggtcaatgagatcaac
ttcgacaaacctgaaaacgcccgcaacaaaatcctgtttgaaaacctgacgcctctgttc
ccacaggaaagactgcgtctggaagccggcaacggcagtacggaagatttatcagcgcgt
atcctggatttggtcgcgcctatcggtaaagggcagcgcggtttgatcgtatcgccgccg
aaagccggtaaaaccctcctcatgcagaacatcgcccaatccatcacccgcaacaatccc
gaaacccatttaatggttctgctgatcgatgaacgccctgaagaggtgaccgagatgcag
cgcaccgtgcgtggtgaagtggttgcgagcaccttcgacgagccgccggcccgtcacgtt
caggttgctgagatggttatcgagaaagccaagcgtctggttgagcataaaaaagacgta
gtgatcctgttggactccatcactcgtctggcgcgtgcttacaacaccattatcccgtcc
tccggcaaagtactgaccggtggtgtggacgcccatgcactggagcgtcccaagcgcttt
tttggcgctgcgcggaatgtcgaagaaggcggcagcctgactatcgtcgctacggcgttg
atcgacaccggctccaaaatggacgaagtgatttatgaagaattcaagggcaccggtaac
ctggaagtgcatttggatcgcagaatttctgaaaagcgcgtcttccctgcgattaacatc
cgtcgctccggcactcgccgtgaagaattgctgatgtccgaggaagagctgcaaagagtg
tggatcctgcgtaagctgctgcactctatggaagacgatatcgccgcggtggagttcctg
cttgataagttgaaggacaccaagaccaacgacgaattcttccaggccatgaaaaagcgc
tag
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