Hahella sp. HNIBRBA332: O5O45_24615
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Entry
O5O45_24615 CDS
T09430
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O45_24615 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahh03019
]
O5O45_24615 (recQ)
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_24615 (recQ)
Enzymes [BR:
hahh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O5O45_24615 (recQ)
Messenger RNA biogenesis [BR:
hahh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O5O45_24615 (recQ)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O5O45_24615 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
zf-Sec23_Sec24
Motif
Other DBs
NCBI-ProteinID:
WLQ12914
LinkDB
All DBs
Position
complement(5564720..5566531)
Genome browser
AA seq
603 aa
AA seq
DB search
MKRISSSLQSPLQALQTLFGYDAFRGPQEAVIGELMAGRDALVLMPTGGGKSLCYQIPAI
LRNGVGVVISPLIALMQDQVDALRQVGVNAGFLNSSLSLAELRDMERALLDQELDMLYIA
PERLTQERTLELLQRTPISLFAIDEAHCVSQWGHDFRADYLQLNLLQERFPHVPRVALTA
TADERTRKEIAERLGLTEAQHFISGFDRPNIQYRITQKQNARQQLLRFLRAEHANDAGIV
YCLSRNKVEQVAEWLCKEGFNALPYHAGLPADVRQEHQQRFLREDGVIVVATIAFGMGID
KPDVRFVAHLDLPKSIESYYQETGRAGRDGQSSTAWMAYGLQDVIKLRQMMEGSPGAEQF
KRVERQKLDAMLGLCEIVSCRRRALLRYFGENAPERCDNCDACLNPAETWDATVPAQKVL
SCIYRTGQRFGVNHLIDVVRGELTDKVKQFGHERLPTFGVGEDLDVAQWRSVLRQLTARG
LLNVDLDGFGALKLTESCRPILRGEQEVRLRRDVKEVMSKAPRRSGESLREEDQPLWDAL
RIRRKELAEEQGVAPYMIFHDATLMEILRHRPQNDMEFLALNGVGKSKLERYGEDFMEIV
RNA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatatcatcttctcttcaatcgccactgcaggctttgcagaccttattcggg
tacgacgcatttcgcggcccgcaggaagccgtcatcggggaactgatggctggccgggac
gccttggtcttgatgcctaccggcggcggcaaatcgctgtgttatcaaattcccgctatc
ttgcgtaatggcgtgggggtggtgatatcccctttgatcgcattgatgcaggatcaggtg
gacgccttgagacaggttggagtcaacgcaggttttctgaattccagtctcagtctggcc
gagttgcgggatatggagcgcgcgctgctggaccaggagctggacatgctctatatcgcg
ccggagcgtctgacgcaagagcgcacgctggagctgctgcaacgcacgcctatctccctg
ttcgctattgatgaagcccattgtgtgtcgcaatggggccacgatttccgcgccgattat
ctacagcttaacttgttgcaggagcgattccctcatgtgcccagggtggcgttgaccgcc
accgccgacgaacgcaccaggaaggaaatcgccgaacgcctggggctgacggaagcgcag
catttcatcagcggttttgatcgtcccaatattcaatatcgcatcacccagaaacagaac
gcgcggcagcagttgttgcgctttttacgcgctgaacacgccaacgacgcaggcattgtt
tactgcttatcccgtaataaagtcgagcaagtggcggaatggctgtgcaaagaaggcttc
aacgcattgccgtatcacgcaggcttaccggcggatgtgcgccaggagcaccagcaacgg
tttttgcgggaagatggcgttatagtggtggcgaccattgctttcggtatgggtattgat
aagccagacgtccgctttgtcgctcacctcgacctccccaagagcattgaatcctattac
caggaaaccggccgtgcgggacgtgacggacagtcgtccaccgcttggatggcctacggg
ctgcaggacgtaatcaagctgcggcagatgatggaaggctctcctggcgcggagcaattc
aaacgggtggagaggcagaagctcgacgccatgctgggattgtgtgaaatcgtcagctgt
cgccgtcgcgcattgctgcgctactttggcgagaatgcgccggagcggtgcgataactgc
gacgcctgcctgaatcctgcggagacctgggatgcgaccgtgccggcgcagaaggttctg
tcctgtatttatcgcacgggtcagcgctttggcgtcaatcatcttattgatgtggtgcga
ggcgaactgaccgacaaggtgaaacagtttggtcatgaacgtcttcccacttttggtgtt
ggcgaagatctggatgtggcgcaatggcgctcggtattgcgccagctaactgcgaggggg
ctgttgaatgtggatctggacggcttcggcgccttgaagctgacggaatcctgccggccc
attttgcgcggcgaacaggaagttcggttacggcgagacgtaaaagaagtgatgtcgaaa
gcgccgcgacgcagtggcgaatcgttacgtgaagaagatcaacctttatgggatgcgttg
cgcatccgtcgcaaggaattggcggaagaacagggcgtggcgccttatatgattttccat
gacgccacgctgatggaaatcttgcgccatcgtcctcagaacgacatggagtttctggct
ctcaacggcgtcggtaagagcaagttggagcgttacggcgaagacttcatggagattgtt
cgcaacgcctga
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