Hahella sp. HNIBRBA332: O5O45_28580
Help
Entry
O5O45_28580 CDS
T09430
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03030
DNA replication
hahh03410
Base excision repair
hahh03420
Nucleotide excision repair
hahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O45_28580 (polA)
03410 Base excision repair
O5O45_28580 (polA)
03420 Nucleotide excision repair
O5O45_28580 (polA)
03440 Homologous recombination
O5O45_28580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahh03032
]
O5O45_28580 (polA)
03400 DNA repair and recombination proteins [BR:
hahh03400
]
O5O45_28580 (polA)
Enzymes [BR:
hahh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O45_28580 (polA)
DNA replication proteins [BR:
hahh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O5O45_28580 (polA)
DNA repair and recombination proteins [BR:
hahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O5O45_28580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O5O45_28580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
DUF1949
Motif
Other DBs
NCBI-ProteinID:
WLQ13689
LinkDB
All DBs
Position
complement(6431234..6433969)
Genome browser
AA seq
911 aa
AA seq
DB search
MSKENRSAPVVLVDGSSYLFRAYHVPNLKELRNSKGQPTGAIRGVVSMLRKLQKDYPESQ
VVAVFDAKGKNFRHEMYPDYKANRPPMPEDLACQIEPLYDIVRAMGLPLLIIEGVEADDV
IGTLAHEATTKGLDAVISTGDKDMAQLVSPHVTLVNTMTETTMDREGVVEKFGVPPELIV
DYLALIGDTVDNIPGVNKCGPKTAVKWLGEFGSLTQVMERADEVKGKIGESLRSSLEQLP
LSKELATIKTDVELPFTLEEVCPNPVDTEALRTWFTELEFRTWIKDLDASPSAKAATPEA
SASPAQSEVRDYQVVTEQDQFDQWIKTLTDAKTFSFDTETTSLNYMEAEIVGVSFAVEPG
KAAYVPVAHDYMGAPEQLERDKVLAALKPLLEDPAYRKIGQNLKYDAHVLANHGVQLNGI
AEDTMLESYVLNSTANRHDMDTLASKHLGRETIHFEDIAGKGAKQLTFNQISLEQAGPYA
AEDADITLQLHHTLNPKLKEEGRLEQVYRDIELPLVPVLMRMEHRGALVDSQRLRTHSQE
LAERMLELEEEAYEKAGQKFNLGSPKQLQEIFYEKLGFDVIKKTPKGQPSTAEPVLQELA
EKYELPRVLLEYRGLSKLKSTYTDKLPEMINPRTGRVHTSYQQAVAATGRLSSSDPNLQN
IPVRNEQGRRIRQAFIAPKGCKLISADYSQIELRIMAHLSGDEGLLKAFSEGLDVHQATA
AEVFNVAFDEVSSEQRRKAKAINFGLIYGMSAFGLARQIHVERGEAQSYIDKYFERYPGV
LNYMNRIRAEAQDTGYVETLFGRRLYLPDIRSSNRNLQQAAERTAINAPMQGTAADIIKR
AMLAVDAWLEGKDAPPAKMIMQVHDELILEVEESAVEAVKEKLIQIMSSAADLNVPLLVE
AGAGNNWDEAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaaaccgttcagcgcctgtcgtcctggtagacggctcctcgtatctgttt
cgcgcctaccacgttcccaatctgaaagagctcaggaactctaaaggacagcctaccggc
gccatcagaggcgtcgtttccatgcttcggaagttgcaaaaagattatccggagagccaa
gtggtcgccgttttcgacgccaagggcaagaactttcgccacgagatgtaccccgattac
aaggccaaccggcctcccatgccggaggatctcgcctgccagatcgagccgttgtacgac
attgtccgcgcgatggggctgcctttactgatcatagaaggcgtagaggccgacgatgtt
ataggcacgctggcccatgaagcaactacaaaagggctggatgcagtaatttccactggc
gataaagacatggcccagctggtgagccctcacgtcactctcgtcaacaccatgacagag
accactatggacagagaaggggtcgtcgagaagtttggcgtgccgccggagctgatcgtg
gattacctggcgctcatcggcgataccgtggacaacatccccggggtgaacaaatgcggc
cccaaaacggccgtcaaatggctcggcgagtttggctccctgacacaggtgatggaacgg
gcggatgaggtcaaaggcaaaatcggcgaaagtctgcgcagcagcctggagcagttgccg
ctgtcaaaagagctggccaccatcaagaccgatgtcgaactgcctttcaccctggaagag
gtttgccccaatcccgtcgatactgaagcgctgcgcacctggtttacagagctggaattc
agaacctggataaaagatctggacgcctcaccctctgcaaaggcggccacccccgaagcc
agcgcctcccccgcgcaaagcgaggtgcgggattaccaagtcgttacggagcaggatcag
tttgatcaatggatcaaaacactgacggacgcgaaaacattcagcttcgacactgagacc
accagcctcaattatatggaagcggaaatcgtcggcgtgtccttcgcggtcgagcccggc
aaagcggcttacgtgcccgtagcccatgactacatgggagcgccggagcagctggagcgt
gataaagttctggcggcactcaagcctctgctggaggaccctgcatatcgcaagatcggc
cagaacctgaaatacgacgcccacgtattggccaatcatggcgtacagctcaacggtatc
gccgaagacaccatgctggagtcctacgtactgaactccaccgctaaccgccatgatatg
gatactctggcctccaaacacttggggcgggaaaccattcactttgaagatatcgcaggc
aaaggggcgaaacagctgaccttcaaccagatcagtcttgagcaagctggcccttacgcc
gccgaggatgcggatatcaccctacaattgcatcacaccctgaatccgaaactaaaagaa
gagggacgtttggagcaggtatatcgcgatatcgagctaccactggtccctgtgttgatg
cgaatggagcatcgcggcgctttggtggacagccagcgtttgcgcacccacagccaggag
ttggctgagcgcatgctggagctggaagaagaagcctatgaaaaagccgggcagaagttc
aatctcggatcgcccaagcagttgcaggagattttctacgagaagctcggcttcgacgtt
atcaagaaaaccccgaaggggcagccctctaccgccgagccggtgttacaggaattggcg
gagaagtatgaactgcctcgcgtccttctggagtaccgtgggctttccaagctgaagtcg
acctacacggacaaactgccggagatgattaacccacgcaccggtcgcgtgcatacctcc
taccagcaggcggtggccgccactggacgtttgtcgtcaagcgatccgaacctgcaaaac
atccccgtgcgtaatgagcagggccgtcgcatccggcaagccttcatcgctcccaagggc
tgcaaactgatctccgccgactactcgcagatcgagctgcgcatcatggctcacctgtct
ggggacgaaggcttattaaaagcattctccgaaggcctggacgtacatcaggcgacggct
gctgaagtcttcaacgtcgcattcgacgaagtcagctctgaacaacgccgcaaagccaaa
gccatcaacttcggtctgatctacggcatgtccgccttcggcctggcccgtcagatccac
gttgagcgcggtgaagcgcagagctatatcgacaaatacttcgagcgctatcccggcgta
ttgaactacatgaaccgcattcgcgcggaagctcaggacacgggatacgtcgagaccctg
ttcggacgccgcctgtatttaccggacattcgctccagcaatcgcaatctgcaacaggcg
gcggagcgcaccgccatcaacgcccctatgcagggtacggcggctgacatcatcaaacgc
gccatgctggcggtggacgcctggttggaaggtaaagatgcgccgccggcgaagatgatc
atgcaggtgcatgatgaattgatcctggaagtagaggaaagcgccgtcgaggcagttaag
gagaagctgatacagattatgtcttccgccgccgacttgaatgtaccactgctggtggaa
gccggcgccggcaataactgggatgaagcgcactag
DBGET
integrated database retrieval system
