Hahella sp. HNIBRBA332: O5O45_28900
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Entry
O5O45_28900 CDS
T09430
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O45_28900 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahh03019
]
O5O45_28900 (pcnB)
Enzymes [BR:
hahh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
O5O45_28900 (pcnB)
Messenger RNA biogenesis [BR:
hahh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O5O45_28900 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WLQ13752
LinkDB
All DBs
Position
complement(6502380..6503753)
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AA seq
457 aa
AA seq
DB search
MLKKLMGLIKPGRKEAGAKPLKLRIIPRDSHIVSRKQISPAALKVLYRLNSANYDAFLVG
GGVRDLLLGAQPKDFDVATSATPEQVREQFNNCRLIGRRFRLAHVRFGREIIEVATFRAG
HQNAGDDAGDAVTSDSGQILRDNVYGNQEEDALRRDFTINALYYCVRDFSIYDYAGGIED
IEHRVLRLIGDPETRYREDPVRMLRAARFAAKLDFSIEERTASPILELGPLLLNIPSARL
FEEVLKLFLSGKAVRTFEILRQFDLFKFLFPETDRLLESEHPHAEKLILQALRNTDKRIA
QDKPVTPAFLYAAMLWSPMQRLQQRYLDDGLPPMQAMHKAIDKVLAQQVKHTALPKRFSQ
PMREIWELQLRLPRKQSKRLQGLVEHPRFRAAYDFLVLREQSGEDLQGLGEWWTRYQEAD
DQGRSKLQQQGPKRDGSGGRRRPRRRPRRTNNSAPSQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagttaatgggcctgataaaaccgggacgcaaagaagccggcgcaaaacct
ttgaaactgcgaattatcccccgcgacagccatatagtctcacgcaagcagatcagccct
gcagcgttgaaagttctctaccgcctgaacagcgccaactatgacgcttttttagtcggt
ggcggcgttcgcgacctattactgggcgcacaacctaaagacttcgacgtcgcaacaagc
gcaactccggaacaggtgcgcgagcagttcaacaactgccgcctgatcggacgtcgcttc
cgactcgcccatgtgcgtttcggccgtgaaatcatagaagtcgcaacattccgcgccggc
catcaaaatgccggcgatgacgctggcgacgccgttaccagcgactcaggtcagatcctg
cgcgacaatgtctatggtaaccaggaagaagacgcgctacgccgcgacttcaccattaac
gcgctttattactgcgtcagagatttcagtatttatgactacgcaggtggcattgaagac
attgaacaccgggttctgcgcctgatcggcgatcctgaaacccgttaccgggaagatcct
gtgcgcatgctgcgcgccgcgagattcgccgcaaaactggatttttcaatagaagaacgt
accgccagccctatcctggagctgggtcccttgttgctcaacattccctctgcgcgcttg
tttgaagaagtactcaagcttttcttatccggtaaagctgtacgcacattcgaaattctg
cgtcagttcgacttattcaagtttctgtttccagaaactgaccgcctgctggaaagcgag
cacccccatgcggaaaaactgattctgcaggcgctgcgcaacacagataagcgaattgct
caggacaagccggtcacccccgcgtttttgtacgccgctatgctgtggtctccaatgcag
aggctacagcaacgctatctggatgacggcttaccgcccatgcaggctatgcacaaagca
atcgacaaagtgctggcgcagcaggtcaaacataccgcgttgcccaaacgtttcagccag
cccatgcgcgaaatctgggaattacagcttcgtctgcctcgtaaacaaagcaagcgtttg
cagggcctggtagagcatccccgcttccgcgccgcctacgacttcctggtcttacgcgaa
caaagcggagaagacctgcaaggacttggcgaatggtggacgcgctatcaggaagccgat
gaccaggggcgcagcaaattacagcagcaaggccctaaacgggatggctccggtgggcgc
agacgtccgcgcagacgaccacgccgcaccaacaacagtgcgccgtcgcaatga
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