Halomonas sp. H10-59: NFG57_12240
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Entry
NFG57_12240 CDS
T11900
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hahq Halomonas sp. H10-59
Brite
KEGG Orthology (KO) [BR:
hahq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahq03032
]
NFG57_12240 (topA)
03400 DNA repair and recombination proteins [BR:
hahq03400
]
NFG57_12240 (topA)
Enzymes [BR:
hahq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NFG57_12240 (topA)
DNA replication proteins [BR:
hahq03032
]
Prokaryotic type
DNA Topoisomerases
NFG57_12240 (topA)
DNA repair and recombination proteins [BR:
hahq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NFG57_12240 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XBO73604
LinkDB
All DBs
Position
complement(2800095..2802728)
Genome browser
AA seq
877 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNEFIVKSSVGHIRDLPTSGSGKAASDPKERARQAAATR
KMSAEEKAVYKQQKAHSQLIRRMGIDPDHGWQANYEILPGKEKVVAELKKLAEKADTVYL
ATDLDREGEAIAWHLRETIGGDEQRYRRVVFNEITKNAIQEAFTDPGQLNMPRVEAQQAR
RFLDRVVGFMLSPLLWAKVARGLSAGRVQSVAMRLISERESEIRAFVPEEFWDVHADLVT
PDGEAIRFELVRQDGKTFRPTSESETLERIAALRKASLAITSREDKPTRSKPNAPFITST
LQQAASGRLGFSVKKTMTLAQRLYEAGYITYMRTDSTNLSREAVESVRDYIGEEFGDRYL
PEAPNRYSSKEGAQEAHEAIRPSEVSRRSTDLAGMERDAERLYELIWRQFVACQMTPAEY
LSSTLSVVVDGYELKAKGRVLKFDGYTRVMTPMGRKEEDQALPDLGEGTPMHLDALDPRQ
HFTKPPARYTEASLVKELEKRGIGRPSTYAAIISTIQDRGYVKLENRRFYAEKLGDIVTE
RLKESFPDLMDYSFTARMEDSLDEIAEGERSWRELLDAFYQEFRGELAKAESDEGMRPNQ
PVPTDIDCPTCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLLPGEEAVAADAGEEA
ETDALRAKERCPVCSTAMDSYLIDEGRKLHICGNSPDCDGYKIEQGKFRIKGYDGPVIEC
DKCGSEMQLKSGRFGKYFGCTSDSCKNTRKLLRNGEVAPPKMDPIPMPELACQKVEDHYV
LRDGASGLFLAASKFPKNRETRPPLVKELKPHAAELPEKYHYLLDAPDQDPDGRPAQIRF
SRKLKEQFVMTDGDNGKASGWKASWDGNKWVVEDKRK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtctctggtcatcgtcgagtcgcccgccaaggcgaagacgatcaacaagtac
ctcggcaacgagttcatcgtgaagtcgagcgtgggtcacatccgtgatcttccgaccagc
ggctctggcaaggcggcttccgatcccaaggagcgggctcgccaggcggccgcgacgcgc
aagatgtcggctgaggaaaaggcggtctacaagcagcagaaggcgcatagccagctgata
cgacgcatgggtatcgaccccgaccatggctggcaggccaactacgagatcctgccgggc
aaggaaaaggtcgtggccgagctcaagaagctggcggagaaagccgacaccgtctatctc
gcgaccgatctggaccgcgaaggggaagccatcgcctggcaccttcgcgagaccatcggt
ggggacgagcaacgctatcgccgggtggtgttcaacgagatcaccaagaatgccatccag
gaagccttcaccgaccccggtcagctgaacatgcccagggtcgaggcccagcaggctcgc
cgcttcctcgatcgtgtggtgggcttcatgctgtcgccgctgctgtgggccaaggtagcc
cgcgggctctcggccggtcgtgtccagtcggtggccatgcgcctgatcagcgagcgcgaa
agcgagattcgcgccttcgtgcccgaggaattctgggacgttcatgccgatctggtgacg
ccggacggcgaggccatccgcttcgagctggtacgtcaggatggcaagacgttcaggccc
accagcgagagcgagaccctcgagcgcatcgctgcgctgcgcaaggccagtcttgcgatc
acctcgcgggaagacaagccgacccggtccaagcccaacgcccccttcatcacctcgacg
ctgcagcaggccgccagtggccggctggggttctcggtgaagaagaccatgaccctggcc
cagcggctctacgaggcgggctacatcacctatatgcgtaccgactcgaccaacctgtcc
cgcgaggcggtggagagcgtgcgtgactatatcggtgaggagttcggcgatcgctacctg
cccgaagcccctaaccgctattccagcaaggaaggcgcccaggaggctcacgaagccatc
cggccgtccgaggtgtcccgtcgctcgaccgacctggcaggcatggagcgggatgccgag
cgcttgtacgaactgatctggcggcagtttgtcgcctgccagatgaccccggcggaatac
ctgtcgtcgaccctgagcgtggtggtggacggctacgagctcaaggccaagggccgggtg
ctcaagttcgatggctacacccgagtgatgacccccatggggcgcaaggaagaggatcag
gcgctgccggatctgggcgagggcaccccgatgcacctcgacgcgctggaccccaggcag
cacttcaccaagccgccggcccgttacaccgaagccagcctggtcaaggagctggagaag
cgcggcatcggtcgcccctcgacctacgccgccatcatctccaccatccaggatcgtggc
tacgtcaagctcgagaaccgacggttctacgccgagaagctgggcgacatcgtcaccgag
cgactcaaggagtcgttccccgacctgatggactactccttcaccgcgcgcatggaggat
agcctcgacgagatcgccgagggcgagcgtagctggcgtgagctgctcgacgccttctat
caggagtttcgcggggagctggccaaggccgagagcgacgaggggatgcggcccaatcag
ccggtacccaccgatatcgactgccccacctgcgggcgcaagatgcagattcgtaccgcc
tcgaccggtgtcttcctcggctgcagcggctacaacctgccgcccaaggagcgctgcaag
accaccatcgacctgctgccgggtgaagaagctgtcgccgccgatgccggcgaagaagcc
gagaccgatgccctgcgcgccaaggaacgctgtccggtgtgttccaccgccatggacagc
tacctgatcgatgaagggcgcaagctgcatatctgcggtaacagccccgactgtgacggc
tacaagatcgaacagggcaagttccgcatcaagggctacgacggcccggtcatcgagtgt
gacaagtgcggctccgagatgcagctcaagtccgggcgcttcggcaagtacttcggctgc
accagtgacagctgcaagaatacccgcaagctgttgcgcaacggtgaagtagctccgccc
aagatggatccgattcccatgccggaactggcctgccagaaggtggaagaccactacgtg
ctgcgcgatggcgccagcgggctgttcctggccgccagcaagttcccgaagaaccgggag
acccgtccgcctctggtcaaggaactgaagccccacgccgccgagctgccggagaagtac
cactacctgctcgatgcgccggaccaggacccggatgggcgcccggctcagattcgtttc
tcgcgcaagctcaaggagcagttcgtgatgaccgacggcgacaatggcaaggccagtggc
tggaaggcgagctgggacggtaacaagtgggtggtggaggacaagcgcaagtga
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