Halomonas sp. H10-59: NFG57_18715
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Entry
NFG57_18715 CDS
T11900
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hahq Halomonas sp. H10-59
Pathway
hahq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hahq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NFG57_18715 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahq03021
]
NFG57_18715 (rpoA)
03400 DNA repair and recombination proteins [BR:
hahq03400
]
NFG57_18715 (rpoA)
Enzymes [BR:
hahq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NFG57_18715 (rpoA)
Transcription machinery [BR:
hahq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NFG57_18715 (rpoA)
DNA repair and recombination proteins [BR:
hahq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NFG57_18715 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
XBO74820
LinkDB
All DBs
Position
complement(4307372..4308370)
Genome browser
AA seq
332 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVETE
IAGVDHEYSAIEGVQEDVIEILLNLKDVAIKMHSRDEAMLSLNKQGPAVVTAGDIAVDHD
VEVVNPEHVIAHVNEGAELKMQLKVARGRGYEPADVRSEADDETRAIGRLQLDATFSPVR
RVSYSVEAARVEQRTDLDKLIINLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQE
VVEEEDHIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLN
EIKDVLAARGLSLGMRLENWPPASLKDDKATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagagatcagc
gcacaccacgcaaagatcgtgctcgagccgttcgagcgtggcttcggccacacgttgggc
aatgctctgcgtcgtatcctgctctcgtccatgcccggctgcgccgtggtggagaccgag
atcgctggtgtcgaccatgagtacagcgcgatcgagggtgtccaggaagatgtcatcgaa
atcctcctgaacctcaaggacgtggcgatcaagatgcacagccgcgacgaggcgatgctc
tcgctgaacaagcagggcccggccgtcgtcaccgctggtgacatcgccgtcgatcacgac
gtcgaagtggtcaaccccgagcacgtcatcgcccacgtcaatgaaggcgccgagctcaag
atgcagctgaaggtggcccgtggtcgcggctatgagcctgcggatgtccgcagcgaagcc
gacgacgagacacgcgccatcggccgtctgcagctggatgcgaccttcagccccgtgcgc
cgcgtttcctacagcgtcgaagccgcccgcgtcgaacagcgcaccgacctcgacaagctg
atcatcaacctggaaaccgacggcaccctggatccggaagaggcgatccgtcgcagcgcg
accatcctgcaagagcagctggcagcgttcgtcgacctggaagccgacaaggaacaggaa
gtggtcgaggaagaggatcatatcgatcccatcctgctgcgccccgtagacgatctcgag
ttgaccgttcgtagcgccaactgcctgaaagccgagaatatctactacatcggcgatctg
attcagcgcaccgaggtggagctgttgaagaccccgaacctcggcaagaagtccttgaac
gagatcaaggacgtgttggctgctcgtggtctgtcccttggcatgcggcttgaaaattgg
ccgccggctagcctgaaggacgacaaggccaccgcctaa
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