Halanaeroarchaeum sp. HSR-CO: HSRCO_0347
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Entry
HSRCO_0347 CDS
T09490
Symbol
eRF1
Name
(GenBank) Peptide chain release factor eRF1
KO
K03265
peptide chain release factor subunit 1
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HSRCO_0347 (eRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahs03019
]
HSRCO_0347 (eRF1)
03012 Translation factors [BR:
hahs03012
]
HSRCO_0347 (eRF1)
Messenger RNA biogenesis [BR:
hahs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HSRCO_0347 (eRF1)
Translation factors [BR:
hahs03012
]
Eukaryotic type
Release factors
HSRCO_0347 (eRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
RbpA
Motif
Other DBs
NCBI-ProteinID:
UWG46646
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Position
complement(315171..316418)
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AA seq
415 aa
AA seq
DB search
MSGTQAEESEDRRKYEFRKVIEDLQERRGSGTQLVTIYVPPDKQISDVVAHVTQEHSEAA
NIKSKDTRTNVQDALSSIKARLKYYDTPPENGMVLFSGAIDAGGGQTDMVTEVLENPPQE
IQSFRYHCDSEFLTEPLEGMLTDKGLYGLIVLDRREANVGWLKGKRVDPVKSATSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAEMANELFVAERHELDGILVGGPSPTKDEFLDGD
YLHHELQDKVLGKFDVAYTDESGLYDLVDAGSAALADAELMQDKDDMETFFKELHGGDLA
TYGFEPTRRNLVMGSVETLLISEDLRQDVVTYECPNGHEERELVDSRHSTPEYECEECGE
SAAEADREDAIEHLMNIADDRGTETHFISTDFEKGEQLLTAFGGVAGILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacgcaggcggaggagtccgaagaccgacggaaatacgagtttcggaaggtc
atcgaggacctccaggagcgccggggcagcggcacccagctcgtcaccatctacgtcccc
ccggacaagcagatttcggacgtcgtcgcccacgtcacccaggagcacagcgaggcggcc
aacatcaagtccaaggacacccggacgaacgtccaggacgccctctcgtctatcaaggcc
cgactgaagtactacgacaccccgccggagaacggcatggtgctgttctcgggcgcgatc
gacgccggcggcgggcagacggacatggtcaccgaggtgctggagaacccgccccaggag
atccagtcgtttcggtaccactgcgattcggagttcctgaccgagccactcgaggggatg
ctcacggacaagggcctctacggcctcatcgtcctcgacagacgcgaggcgaacgtcggc
tggctcaaaggcaagcgcgtcgacccggtgaaatcggccacctcgctggtccccggcaag
cagcggaaaggtggccagtcagcccagcggttcgcccgcctccggctggaggccatcgac
aacttctaccaggaggtcgcggagatggccaacgaactgttcgtcgccgaacgccacgaa
ctcgacggcatcctggtcggcggtccctcgccgacgaaagacgagttcctcgacggcgac
tacctccaccacgagctccaggacaaggtcctcgggaagttcgacgtggcctacaccgac
gaatccgggctttacgacctcgtcgacgccggcagcgccgccctcgcggacgcggagctc
atgcaagacaaagacgacatggagaccttcttcaaggagctccacggcggcgacctcgcc
acctacgggttcgagccgacccgtcgcaacctggtgatgggctcggtggagacgttgctc
atcagcgaggacctccgccaggacgtcgtcacctacgagtgccccaacggccacgaggaa
cgcgaactcgtggattcgagacactcgacacccgagtacgaatgcgaggagtgcggcgaa
tccgcggcggaggccgaccgcgaggacgccatcgagcacctcatgaacatcgccgacgac
cggggaaccgagacccacttcatctcgacggacttcgagaagggcgagcagttgctcacc
gccttcggcggcgtcgccggcatcctccgatactcgacaggcgtctaa
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