Halanaeroarchaeum sp. HSR-CO: HSRCO_0620
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Entry
HSRCO_0620 CDS
T09490
Symbol
uvrD
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03420
Nucleotide excision repair
hahs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HSRCO_0620 (uvrD)
03430 Mismatch repair
HSRCO_0620 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahs03400
]
HSRCO_0620 (uvrD)
Enzymes [BR:
hahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HSRCO_0620 (uvrD)
DNA repair and recombination proteins [BR:
hahs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HSRCO_0620 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HSRCO_0620 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_11
Herpes_ori_bp
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UWG46915
LinkDB
All DBs
Position
577714..579555
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AA seq
613 aa
AA seq
DB search
MTETDPEVTRLFGGPGSGKTTALLDRVDQLLERDDVAVEDILVVSYTRAAAAEVRERLAD
RLDMNPRALRGNVSTMHAKAYDLLNLSRGDVVGENDKEEFCEEFGLPYEDEYASGSRRTA
RSTTLGNKIIATSQWLQRTQRDVADWYDVPFRWNDEEVRLPPEIDENAQVGNKYTPTWPT
SDDRFDIPEAIRGWRSYKGQHGLVGFADMLERVQQRSLVPRVDHLVIDEFQDITQLQYAV
YDEWKPHMETVFIAGDDDQVVYAWQGADPKLLLDEVTDEDVILENSYRLPSHVLDVVNRE
VAHIEERQDKDLRPRKEGGAVEAVESPSVLDLVRNVRSTIRDSEDDSVMVLFRARYQLFE
FVDEFIGEGIPFKALTDQRLWTDRLQQYISAVEALDRDEPIDGLETRRLVDMLQSSAFGT
NERSAFRDYLDDREEAAGEDVDLTEIEVDPETIREYAPFVPAPASAADMLRKVTRYQRRS
VDAYFRGDYQHVDPDRVRVGTIHSAKGREADHVFLATDLTEKVVEQMVATATDREIPAGV
EFTRQSSPVPVLTDNERRVFYVGMSRARERLVLLQNLIDGAPTLPIDVLLYGKPTGNTLE
ESLAGEESVTILQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacggacccggaggttacgcgcctcttcgggggaccagggagcgggaagacg
acagcactgctggaccgagtcgaccaactcctcgaacgggacgacgtcgcggtcgaggac
atcctcgtcgtctcgtacacccgggcggccgcggccgaggtccgcgagcggctcgcagac
cgtctcgacatgaacccgcgagcgcttcgcgggaacgtctcgacgatgcacgcgaaggcc
tacgacctgctcaacctctcgcggggcgacgtggtgggggagaacgacaaggaggagttc
tgcgaggagttcggcctgccctacgaggacgagtatgcatccggatcccgccgcacggcc
cgttcgacgacccttgggaacaagatcatcgcgacgagccagtggctccagcggacccag
cgcgacgtcgccgactggtacgacgtcccgttccgctggaacgacgaggaggttcgcctc
ccaccggagatcgacgagaacgcccaggtcgggaacaagtacacgcccacctggccgacc
agcgacgaccgtttcgacatccccgaggccatccgtgggtggcgctcctacaagggccaa
cacggcctcgtcggcttcgccgacatgctcgagcgggtacagcaacgttcactcgtcccc
cgggtcgaccacctggtcatcgacgaattccaggacatcacccagctgcagtacgcggtc
tacgacgagtggaaaccacacatggagacggtgttcatcgcgggcgacgacgaccaggtc
gtctacgcctggcagggtgccgacccgaaactcctcctcgacgaggtgaccgacgaggac
gtcatcctcgagaactcctaccggctcccctcccacgtgctcgacgtcgtcaaccgcgag
gtcgcccacatcgaggaacgccaggacaaggatctccgtccgcgcaaggagggcggggcc
gtcgaggcggtcgagagcccttcggtcctcgacctcgttcggaacgtgcggagtacgatc
cgcgattccgaagacgactcggtgatggtgctcttccgggcccggtatcagctcttcgag
ttcgtcgacgagttcatcggcgagggaatcccgttcaaggcactcaccgaccagcggttg
tggaccgaccgcctccagcagtacatctcggccgtcgaagccctcgaccgggacgaaccc
atcgacggtctcgagacgcgccgactcgtcgacatgctgcagtcctccgccttcgggacg
aacgagcggtcggcgttccgcgactatctcgacgaccgcgaagaggccgccggcgaggac
gtcgacctcaccgagatcgaggtcgaccccgaaacgatccgcgagtacgcccccttcgtc
ccggcaccggcgtcggcggcggacatgctccggaaggtgacccggtaccagcggcggagc
gtggacgcctacttccgcggcgactaccagcacgtcgacccggaccgggttcgcgtgggc
accatccacagcgccaagggccgcgaggccgaccacgtctttctggcgaccgacctcacc
gagaaggtcgtcgagcagatggtcgcgacggcgaccgaccgcgagattcccgcgggcgtc
gagttcacccgccagtcctccccggtccccgtcctcaccgacaacgaacgccgggtcttc
tacgtcgggatgagtcgcgcccgcgagcgtctcgtgttgctccagaacctcatcgacggc
gccccgaccctccccatcgacgtcctgctctacggcaaacccaccgggaacaccctcgag
gagtccctggccggcgaagagagcgtcaccatcctgcagtag
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