Halanaeroarchaeum sp. HSR-CO: HSRCO_0623
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Entry
HSRCO_0623 CDS
T09490
Symbol
cafA
Name
(GenBank) Ribonuclease G and E
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hahs03009
]
HSRCO_0623 (cafA)
Ribosome biogenesis [BR:
hahs03009
]
Prokaryotic type
rRNA processing factors
HSRCO_0623 (cafA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
Motif
Other DBs
NCBI-ProteinID:
UWG46918
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Position
581505..582962
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AA seq
485 aa
AA seq
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MTPPPSASTDAGADPRPRARVRGIYATALTNHLLSSDPPFDVVQASPPIERRFDREFPAE
PADVTVEMTRDRHGLQIAGDPSAVADLRAAVDDLAIDTFTWSDVAAPGAVFSGTVTDTNG
GGAIVSLADDREGFLPFGNADGYVDVDDEIRVQVTEPHAPWDRGRPVLDTALRIPGDVVT
LEAGVDSLVAGTPDGTPTHELVRTTELLSTTVPDDWGVVWERGAEDLAVADLDAALAAAV
ERANDFDEALDTAAGEGKLATPTHLVWSWFGRSSRFALDALRRDVTATMPGHHRTKAGDE
RASGAVDFAEHLGVQANEFPFEAVTASFGPTEGDRVAIGHGKPDGRYVELGRGAVTAVDP
ETQRVTVERAMTGGGTYDALGVPRVDGDVATTRFTEGRWWYPTVYRSEDGERRGTYVNVS
TPVEVFPDVIRYVDLHVDVIKRADGTVEVVDEAELAASVDAGTVSEPLAEKAMDVASQVA
NALEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacacccccgccgtcggcgtcgaccgacgctggtgccgatccgcgaccgcgggcccgg
gtgcggggaatctacgccaccgcactcacgaaccacctcctctcgagcgacccgccgttc
gacgtggtccaggcgtcaccccctatcgagcggcggttcgaccgggagtttcccgccgaa
ccggccgacgtgaccgtcgagatgacccgggaccgtcacggcctccagatagctggcgat
ccgtcggccgtcgccgatctccgcgccgccgtcgacgacctcgccatcgacacgttcacc
tggtcggacgtcgccgccccaggggcggtcttctcgggcaccgtcacggacacgaacggt
ggtggcgccatcgtctcgctcgcggacgaccgggaggggtttctgcccttcggaaacgcg
gacggatacgtggacgtcgacgacgagatcagagtccaggtgaccgaaccccatgccccg
tgggaccgcggccgccccgtcctggacacggccctccggattccgggggacgtcgtgacc
ctcgaagcgggcgtcgactcgctcgtcgctggtacccccgatgggacaccgacccacgaa
ctggtccggacgaccgaactcctctcgacgacggtcccggacgactggggagtggtgtgg
gaacggggggccgaggacctcgccgtcgccgacctggacgccgcactggcagccgccgtc
gagcgcgcgaacgacttcgacgaagccctcgataccgcggcaggtgaagggaagctcgcg
acacccacgcacctcgtctggtcctggttcggtcggtcgtcgcggttcgccctcgacgcc
ctccgtcgggacgtgaccgcgacgatgcccggtcaccaccgaaccaaggctggggacgaa
cgggcgagcggtgccgtcgacttcgccgaacacctcggcgtccaggcgaacgagtttccg
ttcgaggcggtcaccgcgtcgttcgggcccacggagggtgaccgcgtcgccatcggccac
ggcaagccggacggtcgctacgtggagctcggccggggggcggttacagccgtcgacccg
gagacacaacgggtcaccgtcgagcgggcgatgaccggcggcgggacctacgacgcactg
ggggtgccacgggtcgacggcgacgtcgccacgacccggttcaccgagggacgctggtgg
tatccaacggtctaccgcagcgaggacggcgagcgtcgtggcacctacgtcaacgtctcg
acgccggtcgaggtctttcccgacgtgatccgatacgtcgacctccacgtggacgtcatc
aaacgggcggacgggacggtggaggtcgtggacgaagcggaactcgctgcgtcggtggac
gccggcaccgtctcggaaccgctcgccgagaaggcgatggacgtcgcttcgcaggtcgcg
aatgccctcgaggagtaa
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