Halanaeroarchaeum sp. HSR-CO: HSRCO_0840
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Entry
HSRCO_0840 CDS
T09490
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HSRCO_0840 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_0840 (rpoA2)
Enzymes [BR:
hahs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HSRCO_0840 (rpoA2)
Transcription machinery [BR:
hahs03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HSRCO_0840 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Coatomer_b_Cpla
Motif
Other DBs
NCBI-ProteinID:
UWG47129
LinkDB
All DBs
Position
807498..808685
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AA seq
395 aa
AA seq
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MTEITDAVEAVVEDTELPLRLRENVYETVEDRDDLSLEQIEEIASAVEAEYLDNRVPPLD
PVGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVYLED
EYATDREKAHEVVWQIEATKILALGDISTNVADMIVSVNLNEDTLQERWPTLDSTNQIAG
EIAETMEDALGVKVTQEGTVLEFGPEQPSYRELLQLVEALRDVVFKGIEDISRVVIRKEQ
MDDGEQFVLYTEGSAFKKTLAIEGVDASRTTCNNIHEIHSTLGIEAARETIIEETRETLE
EQGLGDVNIRHLMLVADIMTNDGTIQSIGRHGISGNKESVLARAAFEVTVNHLLDAAIYG
EADDLNGVIENVIVGKAVKLGTGDVDLRMSASKSD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatcaccgacgcggtcgaagcggtcgtcgaggacacggaattgcctctcagg
ctccgagagaacgtctacgagaccgtcgaggaccgagacgatctctcgctcgaacagatc
gaggagatcgcttcggcagtcgaagcggaatatctcgacaatcgcgttcccccactggac
cccgtcgggacagtctcggcgcagtccatcggcgaaccggggacgcagatgacgatgaac
accttccactacgcgggcgtcgccgagatcgacgtgacccagggcctcccgcgacttatc
gagctggtggacgcgcgcaagacgccggacaccccgatgatgacggtctacctggaggac
gaatacgccaccgatcgcgagaaggcccacgaggtcgtctggcagatcgaggcgacgaag
atcctcgcgctgggggacatctcgaccaacgtggcggacatgatcgtcagcgtgaacctg
aacgaagacaccctccaggagcgatggcctaccctggacagcacgaaccagatcgctggc
gagatcgcggagacgatggaggacgcactcggtgtgaaggtcacccaggagggaaccgtc
ctcgagttcgggccggaacagcccagttaccgcgaactgctccagctcgtcgaagcgctt
cgcgacgtggtgttcaaaggcatcgaggacatctcccgggtcgtcatccgcaaagagcag
atggacgacggcgaacagttcgtcctctacaccgagggctcggcgttcaagaagacactc
gccatcgagggcgtcgacgcctcgcggacgacctgtaacaacatccacgagatccacagt
acgctgggcatcgaggccgcccgtgagaccatcatcgaggagacccgcgagaccctcgaa
gaacagggtctcggcgacgtgaacatccgtcacctcatgctggtcgcggacatcatgacc
aacgatggcaccattcagtcgatcggccgccacggtatctccggaaacaaggagagcgtc
ctcgcccgtgcggcgttcgaggtcacggtgaaccacctgctcgatgcggccatctacggg
gaggccgacgacctcaacggcgtcatcgagaacgtcatcgtcggcaaggccgtgaaactc
gggaccggcgacgtcgaccttcgcatgtccgcgagcaagtcggactag
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